RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 SDHAF3Q9NRP4 125 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 ACOXLQ9NUZ1 547 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 MRPL39Q9NYK5 338 aaKnown RBP6.02□□□□□ -1.45
USP28-206ENST00000538224 COPZ2Q9P299 210 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 CTSFQ9UBX1 484 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 LAMP5Q9UJQ1 280 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 NXT1Q9UKK6 140 aaKnown RBP6.02□□□□□ -1.45
USP28-206ENST00000538224 SPATA2Q9UM82 520 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 TMED7Q9Y3B3 224 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 ETV7Q9Y603 341 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 ABCA7Q8IZY2 2146 aa6.02□□□□□ -1.45
USP28-206ENST00000538224 UNC13CQ8NB66 2214 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 IDSB3KWA1 339 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 AIPO00170 330 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZNF208O43345 1280 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 SCO2O43819 266 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 NPIPB7O75200 414 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 SLC43A1O75387 559 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZFAND5O76080 213 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 DXOO77932 396 aaKnown RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 CER1O95813 267 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 DCNP07585 359 aaKnown RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 RAB40ALP0C0E4 278 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 CALCBP10092 127 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 EPXP11678 715 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 PRKCAP17252 672 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 FKBP2P26885 142 aaKnown RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 CCKBRP32239 447 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 CDKN2AP42771 156 aaKnown RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 EMP2P54851 167 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 CLDN20P56880 219 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 BTG1P62324 171 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 LTBQ06643 244 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 TRA2AQ13595 282 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP28-206ENST00000538224 ALKBH1Q13686 389 aaKnown RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 INSL4Q14641 139 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 P2RY14Q15391 338 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 SHBQ15464 509 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 Q499Y3 187 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZFP69Q49AA0 526 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 GXYLT1Q4G148 440 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZNF684Q5T5D7 378 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 TIGD3Q6B0B8 471 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 GUSBP11Q6P575 273 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 KCTD18Q6PI47 426 aaPredicted RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 PAPD4Q6PIY7 484 aaKnown RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 RPTNQ6XPR3 784 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 MARCH3Q86UD3 253 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 PPP1R3BQ86XI6 285 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 PRSS58Q8IYP2 241 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 RFLNBQ8N5W9 214 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 YIPF7Q8N8F6 280 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZNF454Q8N9F8 522 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 OR4M1Q8NGD0 313 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 OR51L1Q8NGJ5 315 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 OR6N2Q8NGY6 317 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 OR5AK2Q8NH90 309 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 CEP76Q8TAP6 659 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZNF417Q8TAU3 575 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZNF671Q8TAW3 534 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 ZNF519Q8TB69 540 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 SAP25Q8TEE9 199 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 RAB40AQ8WXH6 277 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 DDIT4LQ96D03 193 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 DERL3Q96Q80 235 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 OR14A2Q96R54 314 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 OR6C1Q96RD1 312 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 WACQ9BTA9 647 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 TRAF4Q9BUZ4 470 aaPredicted RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 NRSN2Q9GZP1 204 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 IRF2BPLQ9H1B7 796 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 TXNIPQ9H3M7 391 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 WDR54Q9H977 334 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 BRD7Q9NPI1 651 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 PRMT8Q9NR22 394 aaPredicted RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 VSX1Q9NZR4 365 aaPredicted RBP6.01□□□□□ -1.45
USP28-206ENST00000538224 MALT1Q9UDY8 824 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 PILRBQ9UKJ0 227 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 IKZF2Q9UKS7 526 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 COPS3Q9UNS2 423 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 CAMK2AQ9UQM7 478 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 UNC80Q8N2C7 3258 aa6.01□□□□□ -1.45
USP28-206ENST00000538224 TNRC18O15417 2968 aaPredicted RBP6□□□□□ -1.45
USP28-206ENST00000538224 IGLV3-32A0A0A0MS00 114 aa6□□□□□ -1.45
USP28-206ENST00000538224 TNFSF12-TNFSF13A0A0A6YY99 330 aa6□□□□□ -1.45
USP28-206ENST00000538224 A0A0G2JMP0 313 aa6□□□□□ -1.45
USP28-206ENST00000538224 TRBV5-5A0A0J9YX44 114 aa6□□□□□ -1.45
USP28-206ENST00000538224 IGHV5-10-1A0A0J9YXX1 117 aa6□□□□□ -1.45
USP28-206ENST00000538224 TRBV11-1A0A0K0K1C0 115 aa6□□□□□ -1.45
USP28-206ENST00000538224 A0A0X1KG70 313 aa6□□□□□ -1.45
USP28-206ENST00000538224 TMEM72A0PK05 275 aa6□□□□□ -1.45
USP28-206ENST00000538224 CPED1A4D0V7 1026 aa6□□□□□ -1.45
USP28-206ENST00000538224 PRSS37A4D1T9 235 aa6□□□□□ -1.45
USP28-206ENST00000538224 CDC14CA4D256 554 aa6□□□□□ -1.45
USP28-206ENST00000538224 C19orf67A6NJJ6 358 aa6□□□□□ -1.45
USP28-206ENST00000538224 VSTM2BA6NLU5 285 aa6□□□□□ -1.45
USP28-206ENST00000538224 TTLL8A6PVC2 850 aa6□□□□□ -1.45
USP28-206ENST00000538224 ETV2O00321 342 aaPredicted RBP6□□□□□ -1.45
USP28-206ENST00000538224 TFECO14948 347 aaPredicted RBP6□□□□□ -1.45
USP28-206ENST00000538224 PLA2G10O15496 165 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms