RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PLXNA2O75051 1894 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF354AO60765 605 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ZIC2O95409 532 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PLGP00747 810 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 RPLP1P05386 114 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 CST2P09228 141 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 HAPLN1P10915 354 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 HOXA1P49639 335 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ARSIQ5FYB1 569 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FUBP1Q96AE4 644 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ATF6BQ99941 703 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 RTCAO00442 366 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 BCL2L11O43521 198 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 LGI1O95970 557 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GNRH1P01148 92 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ACTR1BP42025 376 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF157P51786 506 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SEC13P55735 322 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 LRRTM4Q86VH4 590 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 RXFP4Q8TDU9 374 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ENKD1Q9H0I2 346 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 NENFQ9UMX5 172 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 GPX5O75715 221 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PMS2P11Q13670 270 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 HNF4GQ14541 408 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MSMO1Q15800 293 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 KDM4DQ6B0I6 523 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 Q6ZN92 141 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR1J1Q8NGS3 322 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FAM163AQ96GL9 167 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PRDM7Q9NQW5 492 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 DUSP22Q9NRW4 184 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MTCH1Q9NZJ7 389 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 C5AR2Q9P296 337 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 CCL16O15467 120 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 PRSS56P0CW18 603 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MTNR1BP49286 362 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ACSM1Q08AH1 577 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 MALLQ13021 153 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 ALKBH1Q13686 389 aaKnown RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR7A5Q15622 319 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM183BQ1AE95 376 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 NXNL2Q5VZ03 156 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 FBXW12Q6X9E4 464 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 IL34Q6ZMJ4 242 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM135Q86UB9 458 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 LYSMD1Q96S90 227 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 SLC25A21Q9BQT8 299 aaPredicted RBP5.28□□□□□ -1.56
CSMD1-215ENST00000537824 OR5V1Q9UGF6 321 aa5.28□□□□□ -1.56
CSMD1-215ENST00000537824 TOGARAM1Q9Y4F4 1720 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF320A2RRD8 509 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PLSCR1O15162 318 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 HCRTO43612 131 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 NDUFB2O95178 105 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PRDX3P30048 256 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 DHPSP49366 369 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CLDN20P56880 219 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CEBPEQ15744 281 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 RAB6CQ53S08 254 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 C22orf15Q8WYQ4 148 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SAT2Q96F10 170 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 NICN1Q9BSH3 213 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 RAB6CQ9H0N0 254 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ARV1Q9H2C2 271 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 IGFLR1Q9H665 355 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 MMP26Q9NRE1 261 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 DKKL1Q9UK85 242 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SNX11Q9Y5W9 270 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 A6NLC8 198 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CLDN1O95832 211 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF250P15622 560 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TACR3P29371 465 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PRSS42Q7Z5A4 293 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 NPWQ8N729 165 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM37Q8WXS4 190 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TVP23CQ96ET8 276 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SLC2A11Q9BYW1 496 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 GPR173Q9NS66 373 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF727A8MUV8 499 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ACAA1P09110 424 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PLXNA3P51805 1871 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CBLN2Q8IUK8 224 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 C15orf54Q8N8G6 183 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PLXNB3Q9ULL4 1909 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 IGLV3-22A0A075B6J6 115 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 A0A1B0GUH1 482 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM212A6NML5 194 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 H3BQ06 376 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 XCR1P46094 333 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 UBE2MP61081 183 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 MAT1AQ00266 395 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 BAMBIQ13145 260 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 IER5LQ5T953 404 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 GCNT2Q8N0V5 402 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 OR4F5Q8NH21 305 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 HAVCR2Q8TDQ0 301 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 MS4A4EQ96PG1 132 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 OR4F4Q96R69 305 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 GPRIN2O60269 458 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 MMP7P09237 267 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms