RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 A0A1B0GTH9 108 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 NAP1L6A6NFF2 107 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 TVP23AA6NH52 213 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 C10orf142B7Z368 130 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 CALCBP10092 127 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 APEHP13798 732 aaKnown RBP13.03□□□□□ -0.32
USP44-203ENST00000537435 ADRA2CP18825 462 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 SKP2Q13309 424 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 KIAA0895LQ68EN5 471 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 KCTD20Q7Z5Y7 419 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 CDH24Q86UP0 819 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 ELMOD2Q8IZ81 293 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 OR2T35Q8NGX2 323 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 LIPHQ8WWY8 451 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 ZNF524Q96C55 264 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 HAVCR1Q96D42 359 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 DPCDQ9BVM2 203 aaPredicted RBP13.03□□□□□ -0.32
USP44-203ENST00000537435 METTL17Q9H7H0 456 aaPredicted RBP13.03□□□□□ -0.32
USP44-203ENST00000537435 UBQLN4Q9NRR5 601 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 CD207Q9UJ71 328 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 MMP17Q9ULZ9 603 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 SLC6A5Q9Y345 797 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 NPTNQ9Y639 398 aa13.03□□□□□ -0.32
USP44-203ENST00000537435 ARPC1BO15143 372 aaKnown RBP13.02□□□□□ -0.32
USP44-203ENST00000537435 SULT1B1O43704 296 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 TMEM127O75204 238 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 TOXO94900 526 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 ABHD16AO95870 558 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 TGM6O95932 706 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 IGF2P01344 180 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 RAB40ALP0C0E4 278 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 ASAH2BP0C7U1 165 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 CDK2P24941 298 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 MST1P26927 711 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 HSD17B7P56937 341 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 RPL18Q07020 188 aaKnown RBP13.02□□□□□ -0.32
USP44-203ENST00000537435 ELFN2Q5R3F8 820 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 NLRC3Q7RTR2 1065 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 CDC20BQ86Y33 519 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 EID2Q8N6I1 236 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 ZNF321PQ8N8H1 164 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 DNAAF1Q8NEP3 725 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 RAB40AQ8WXH6 277 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 TOE1Q96GM8 510 aaKnown RBP13.02□□□□□ -0.32
USP44-203ENST00000537435 TCTN2Q96GX1 697 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 LPAR4Q99677 370 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 FKRPQ9H9S5 495 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 IKZF2Q9UKS7 526 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 SLCO1B1Q9Y6L6 691 aa13.02□□□□□ -0.32
USP44-203ENST00000537435 ANKRD20A5PA0PJZ0 165 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 C17orf105B2RV13 164 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 G3V3Q6 166 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 SCDO00767 359 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 PRAF2O60831 178 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 MAPK3P27361 379 aaPredicted RBP13.02□□□□□ -0.33
USP44-203ENST00000537435 ADH7P40394 386 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 RPS27P42677 84 aaKnown RBP13.02□□□□□ -0.33
USP44-203ENST00000537435 P2RX1P51575 399 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 ART1P52961 327 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 BLVRAP53004 296 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 GRM7Q14831 915 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 MESTQ5EB52 335 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 FAM209AQ5JX71 171 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 FAAP20Q6NZ36 180 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.33
USP44-203ENST00000537435 OR6N2Q8NGY6 317 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 KTI12Q96EK9 354 aaPredicted RBP13.02□□□□□ -0.33
USP44-203ENST00000537435 KLHDC3Q9BQ90 382 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 MRI1Q9BV20 369 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 LRRC61Q9BV99 259 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 TAS2R10Q9NYW0 307 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 GRHPRQ9UBQ7 328 aa13.02□□□□□ -0.33
USP44-203ENST00000537435 TRBV5-5A0A0J9YX44 114 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 LINC00862A6NCI5 91 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 CRYZL1O95825 349 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 DCTDP32321 178 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 RPL6Q02878 288 aaKnown RBP13.01□□□□□ -0.33
USP44-203ENST00000537435 METTL11BQ5VVY1 283 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 SLC25A25Q6KCM7 469 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 SEZ6L2Q6UXD5 910 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 TMPRSS12Q86WS5 348 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 CCDC28AQ8IWP9 274 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 OR2T4Q8NH00 348 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 MIB2Q96AX9 1013 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 TSPAN32Q96QS1 320 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 LAMP5Q9UJQ1 280 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 A0A1B0GUH1 482 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 MEN1O00255 615 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 ZNF264O43296 627 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 MPC2O95563 127 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 TXNDC12O95881 172 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 MAS1P04201 325 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 TMIGD3P0DMS9 266 aaPredicted RBP13.01□□□□□ -0.33
USP44-203ENST00000537435 LCN1P31025 176 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 RAD52P43351 418 aa13.01□□□□□ -0.33
USP44-203ENST00000537435 PPM1FP49593 454 aaPredicted RBP13.01□□□□□ -0.33
USP44-203ENST00000537435 CCR5P51681 352 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms