RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 VNN3Q9NY84 501 aa9.96□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TAS2R16Q9NYV7 291 aa9.96□□□□□ -0.82
TNFRSF1A-208ENST00000536194 UPB1Q9UBR1 384 aa9.96□□□□□ -0.82
TNFRSF1A-208ENST00000536194 NDRG3Q9UGV2 375 aa9.96□□□□□ -0.82
TNFRSF1A-208ENST00000536194 NOX1Q9Y5S8 564 aa9.96□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ANKHD1Q8IWZ3 2542 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-208ENST00000536194 DCHS2Q6V1P9 2916 aa9.96□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TRAV27A0A087WT01 109 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 A0A1W2PPR1 153 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SH3PXD2BA1X283 911 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 AQP12BA6NM10 295 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RNF13O43567 381 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ATP5HO75947 161 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR6A2O95222 327 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 GADD45GO95257 159 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HIST1H2ABP04908 130 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 F13BP05160 661 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 IFNGR1P15260 489 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 PPP3CBP16298 524 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF26P17031 533 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CRYGSP22914 178 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 IL32P24001 234 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 LOXP28300 417 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SSTR2P30874 369 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RRM2P31350 389 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ERFP50548 548 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 BIDP55957 195 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 FLOT2Q14254 428 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 MELKQ14680 651 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 GABRA6Q16445 453 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CARD17Q5XLA6 110 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TMPRSS11FQ6ZWK6 438 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SLC35D2Q76EJ3 337 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ASRGL1Q7L266 308 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HIST3H2AQ7L7L0 130 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 AQP12AQ8IXF9 295 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 POMGNT2Q8NAT1 580 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ANKK1Q8NFD2 765 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 STEAP2Q8NFT2 490 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR4K5Q8NGD3 323 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CANT1Q8WVQ1 401 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HIST1H2ACQ93077 130 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF837Q96EG3 531 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 FAM46AQ96IP4 442 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 LRGUKQ96M69 825 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF347Q96SE7 839 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 GPA33Q99795 319 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 MCCC2Q9HCC0 563 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RASSF1Q9NS23 344 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HIF3AQ9Y2N7 669 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 LYVE1Q9Y5Y7 322 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RAI1Q7Z5J4 1906 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 UNC79Q9P2D8 2635 aa9.95□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TCRBV3S1A0A5B6 114 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HTR3EA5X5Y0 456 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 EFCAB9A8MZ26 197 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CLOCKO15516 846 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 KLF4O43474 513 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SLC43A1O75387 559 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HRGP04196 525 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SAGP10523 405 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 MPGP29372 298 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RASSF2P50749 326 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 FXYD6P3P58550 94 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CHRNB3Q05901 458 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RUNX1T1Q06455 604 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 PPP1R8Q12972 351 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CAMK2DQ13557 499 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 FAM98BQ52LJ0 330 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OAFQ86UD1 273 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 IGFN1Q86VF2 1251 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 C20orf196Q8IYI0 205 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR4C15Q8NGM1 316 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR51A7Q8NH64 312 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR6X1Q8NH79 312 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 UTP4Q969X6 686 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 MUS81Q96NY9 551 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TNFRSF13CQ96RJ3 184 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 NELFAQ9H3P2 528 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 GPR35Q9HC97 309 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 INIPQ9NRY2 104 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SIGLEC7Q9Y286 467 aa9.94□□□□□ -0.82
TNFRSF1A-208ENST00000536194 A0A1W2PR80 420 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 DHRS12A0PJE2 317 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CIB4A0PJX0 185 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR5H1A6NKK0 313 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ZNF587BE7ETH6 402 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RPL36A-HNRNPH2H7BZ11 118 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 M0R3G1 203 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 KRT33AO76009 404 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 RAP2AP10114 183 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 CDH2P19022 906 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 HMGA2P52926 109 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 SMIM11AP58511 58 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 STK11Q15831 433 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ACKR1Q16570 336 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 ALG10Q5BKT4 473 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 TIMM23BQ5SRD1 257 aa9.93□□□□□ -0.82
TNFRSF1A-208ENST00000536194 OR2T5Q6IEZ7 315 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms