RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 LHFPL4Q7Z7J7 247 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 CBWD2Q8IUF1 395 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 EID2Q8N6I1 236 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 OR9A4Q8NGU2 314 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 SELENOMQ8WWX9 145 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 NUS1Q96E22 293 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 BBS2Q9BXC9 721 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 ASB7Q9H672 318 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 UXTQ9UBK9 157 aaPredicted RBP4.49□□□□□ -1.69
CASP4-213ENST00000534356 PDE10AQ9Y233 779 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 AP4B1Q9Y6B7 739 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 BSNQ9UPA5 3926 aa4.49□□□□□ -1.69
CASP4-213ENST00000534356 ZFC3H1O60293 1989 aaKnown RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 A0A1W2PNU3 283 aaPredicted RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 LANCL1O43813 399 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 TRIM3O75382 744 aaPredicted RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 HSPB1P04792 205 aaKnown RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 H2AFXP16104 143 aaPredicted RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 DPP4P27487 766 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 UGT1A3P35503 534 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 OR3A4PP47883 348 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 STX17P56962 302 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 RND3P61587 244 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 SMARCB1Q12824 385 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 HES3Q5TGS1 186 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 UNC5DQ6UXZ4 953 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 LANCL3Q6ZV70 420 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 CENPQQ7L2Z9 268 aaPredicted RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 MOB1BQ7L9L4 216 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 ZNF720Q7Z2F6 126 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 CD302Q8IX05 232 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 OR2T33Q8NG76 320 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 NDRG1Q92597 394 aaKnown RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 FBXO32Q969P5 355 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 HPDLQ96IR7 371 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 MAGEB18Q96M61 343 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 NOL4LQ96MY1 436 aaPredicted RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 CLMPQ9H6B4 373 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 TM9SF3Q9HD45 589 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 HMGXB4Q9UGU5 601 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 TLN1Q9Y490 2541 aaKnown RBP4.48□□□□□ -1.69
CASP4-213ENST00000534356 ICE1Q9Y2F5 2266 aa4.48□□□□□ -1.69
CASP4-213ENST00000534356 FAM47DPA6NHR8 397 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 FAM74A7A6NL05 159 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 WWP2O00308 870 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 SLC9A3R1O14745 358 aaPredicted RBP4.47□□□□□ -1.69
CASP4-213ENST00000534356 CACNG3O60359 315 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 STX11O75558 287 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 IGHV3-23P01764 117 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 IGHV4-34P06331 123 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 ZDHHC11BP0C7U3 371 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 BCKDHAP12694 445 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 CCDC130P13994 396 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 WARSP23381 471 aaKnown RBP4.47□□□□□ -1.69
CASP4-213ENST00000534356 ADRA1AP35348 466 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 CASP4P49662 377 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 DIO3P55073 304 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 RIPPLY3P57055 190 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 MYL6P60660 151 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 VLDLRP98155 873 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 TRIP10Q15642 601 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 FAM74A3Q4VXF1 159 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 KDM7AQ6ZMT4 941 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 SCD5Q86SK9 330 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 SERPINA9Q86WD7 417 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 TMEM86AQ8N2M4 240 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 C12orf29Q8N999 325 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 ZSCAN4Q8NAM6 433 aaPredicted RBP4.47□□□□□ -1.69
CASP4-213ENST00000534356 SCFD1Q8WVM8 642 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 DNAJC19Q96DA6 116 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 VPS39Q96JC1 886 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 FEM1AQ9BSK4 669 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 Q9H3A6 140 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 SMYD3Q9H7B4 428 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 COG4Q9H9E3 785 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 PDFQ9HBH1 243 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 PARVGQ9HBI0 331 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 RBAKQ9NYW8 714 aaPredicted RBP4.47□□□□□ -1.69
CASP4-213ENST00000534356 CDH9Q9ULB4 789 aa4.47□□□□□ -1.69
CASP4-213ENST00000534356 COL27A1Q8IZC6 1860 aaPredicted RBP4.47□□□□□ -1.69
CASP4-213ENST00000534356 CREBBPQ92793 2442 aa4.46□□□□□ -1.69
CASP4-213ENST00000534356 UBR5O95071 2799 aaPredicted RBP4.46□□□□□ -1.7
CASP4-213ENST00000534356 A0A1B0GTQ1 180 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 K7ENP7 123 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 SDHDO14521 159 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 AKR7A3O95154 331 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 ANP32DO95626 131 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 LDOC1O95751 146 aaPredicted RBP4.46□□□□□ -1.7
CASP4-213ENST00000534356 THRBP10828 461 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 AZU1P20160 251 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 PSMB1P20618 241 aaKnown RBP4.46□□□□□ -1.7
CASP4-213ENST00000534356 ANXA13P27216 316 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 GNPDA1P46926 289 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 TRPC1P48995 793 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 ACADVLP49748 655 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 MAP3K7CLP57077 242 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 RPS14P62263 151 aaKnown RBP4.46□□□□□ -1.7
CASP4-213ENST00000534356 KYAT1Q16773 422 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 PVRIGQ6DKI7 326 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 OR8G2PQ6IF36 304 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms