RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 RBMS3Q6XE24 437 aaKnown RBP12.33□□□□□ -0.44
CDC27-209ENST00000532893 IFT20Q8IY31 132 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 SIGLECL1Q8N7X8 197 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 PIK3C3Q8NEB9 887 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 DVL3Q92997 716 aaPredicted RBP12.33□□□□□ -0.44
CDC27-209ENST00000532893 RAB39BQ96DA2 213 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 SLC17A7Q9P2U7 560 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 OPN4Q9UHM6 478 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 PRDM4Q9UKN5 801 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 ZNF346Q9UL40 294 aaKnown RBP12.33□□□□□ -0.44
CDC27-209ENST00000532893 NOTCH1P46531 2555 aa12.33□□□□□ -0.44
CDC27-209ENST00000532893 PRKDCP78527 4128 aaKnown RBP12.33□□□□□ -0.44
CDC27-209ENST00000532893 A0A096LPI6 279 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 IGHV2-5P01817 119 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 PRTN3P24158 256 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 GTF2E2P29084 291 aaKnown RBP12.32□□□□□ -0.44
CDC27-209ENST00000532893 GIPRP48546 466 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 EGR4Q05215 589 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 NKPD1Q17RQ9 610 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 SPANXN4Q5MJ08 99 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 COX20Q5RI15 118 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 ZNF813Q6ZN06 617 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 ZNF836Q6ZNA1 936 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 TMEM123Q8N131 208 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 CLIP4Q8N3C7 705 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 OR52P1PQ8NH57 321 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 MGARPQ8TDB4 240 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 KTI12Q96EK9 354 aaPredicted RBP12.32□□□□□ -0.44
CDC27-209ENST00000532893 AKTIPQ9H8T0 292 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 TAAR3PQ9P1P4 343 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 CMYA5Q8N3K9 4069 aa12.32□□□□□ -0.44
CDC27-209ENST00000532893 CCDC154A6NI56 674 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 CLPTM1O96005 669 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 FSHBP01225 129 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 RAD52P43351 418 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 ANXA11P50995 505 aaKnown RBP12.31□□□□□ -0.44
CDC27-209ENST00000532893 RAB1AP62820 205 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 RAB39AQ14964 217 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 MAPK11Q15759 364 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 SMU1Q2TAY7 513 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 LIN52Q52LA3 116 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 TMEM154Q6P9G4 183 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 ZNF771Q7L3S4 317 aaPredicted RBP12.31□□□□□ -0.44
CDC27-209ENST00000532893 PNPT1Q8TCS8 783 aaKnown RBP12.31□□□□□ -0.44
CDC27-209ENST00000532893 EPS8L3Q8TE67 593 aaKnown RBP12.31□□□□□ -0.44
CDC27-209ENST00000532893 TESCQ96BS2 214 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 LRRC58Q96CX6 371 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 CCDC115Q96NT0 180 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 EMC6Q9BV81 110 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 HINT3Q9NQE9 182 aaKnown RBP12.31□□□□□ -0.44
CDC27-209ENST00000532893 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 POFUT2Q9Y2G5 429 aa12.31□□□□□ -0.44
CDC27-209ENST00000532893 C17orf100A8MU93 164 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 M0R082 166 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 RAB36O95755 333 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 NUDT17P0C025 328 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 B4GALT1P15291 398 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 CBLP22681 906 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 GATA3P23771 443 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 S100A3P33764 101 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 SERPINB5P36952 375 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 CRYBB2P43320 205 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 HOXC5Q00444 222 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 MFSD13AQ14CX5 517 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 ZNF621Q6ZSS3 439 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 H1FNTQ75WM6 255 aaPredicted RBP12.3□□□□□ -0.44
CDC27-209ENST00000532893 SERPINA11Q86U17 422 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 TREML1Q86YW5 311 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 C20orf196Q8IYI0 205 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 ZNF417Q8TAU3 575 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 UBLCP1Q8WVY7 318 aaPredicted RBP12.3□□□□□ -0.44
CDC27-209ENST00000532893 ANP32BQ92688 251 aaKnown RBP12.3□□□□□ -0.44
CDC27-209ENST00000532893 TAF15Q92804 592 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDC27-209ENST00000532893 TAAR8Q969N4 342 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 APOPT1Q96IL0 206 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 C16orf45Q96MC5 204 aaPredicted RBP12.3□□□□□ -0.44
CDC27-209ENST00000532893 TSPAN32Q96QS1 320 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 ZNF587Q96SQ5 575 aaPredicted RBP12.3□□□□□ -0.44
CDC27-209ENST00000532893 ZNF443Q9Y2A4 671 aaPredicted RBP12.3□□□□□ -0.44
CDC27-209ENST00000532893 WIPI2Q9Y4P8 454 aa12.3□□□□□ -0.44
CDC27-209ENST00000532893 IGHV1-69-2A0A0G2JMI3 117 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 DNAJC9-AS1A6NH13 148 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 POM121CA8CG34 1229 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 AIM2O14862 343 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 TRAF3IP2O43734 574 aaPredicted RBP12.29□□□□□ -0.44
CDC27-209ENST00000532893 AKAP8O43823 692 aaKnown RBP12.29□□□□□ -0.44
CDC27-209ENST00000532893 SPAG7O75391 227 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 PATE4P0C8F1 98 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 HLA-DOBP13765 273 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 GRPRP30550 384 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 LSP1P33241 339 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 CDKN2CP42773 168 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 SELENOVP59797 346 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 LCN2P80188 198 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 TXNL4AP83876 142 aaKnown RBP12.29□□□□□ -0.44
CDC27-209ENST00000532893 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
CDC27-209ENST00000532893 LRRC34Q8IZ02 419 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 TRIML2Q8N7C3 387 aa12.29□□□□□ -0.44
CDC27-209ENST00000532893 LRR1Q96L50 414 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms