RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 DEPDC4Q8N2C3 294 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-222ENST00000532285 WFDC11Q8NEX6 87 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 MAGEE2Q8TD90 523 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-222ENST00000532285 SMAP2Q8WU79 429 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-222ENST00000532285 BCL2L2Q92843 193 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-222ENST00000532285 HS6ST2Q96MM7 605 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 KCTD14Q9BQ13 255 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-222ENST00000532285 GSX2Q9BZM3 304 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 GPR35Q9HC97 309 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 MEPEQ9NQ76 525 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-222ENST00000532285 CISD1Q9NZ45 108 aaKnown RBP20.11■□□□□ 0.81
CAPN1-222ENST00000532285 ZNF469Q96JG9 3925 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-222ENST00000532285 SLC35F4A4IF30 521 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 ZNF726A6NNF4 738 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 C11orf98E9PRG8 122 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 IGF2P01344 180 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 MT-ND1P03886 318 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 ASAH2BP0C7U1 165 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 DANCRP0C864 163 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 HOXB1P14653 301 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-222ENST00000532285 PAX1P15863 534 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 IFNA8P32881 189 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 CDH11P55287 796 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 UBE2NP61088 152 aaKnown RBP20.1■□□□□ 0.81
CAPN1-222ENST00000532285 FOXD4Q12950 439 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-222ENST00000532285 SLC22A25Q6T423 547 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 PRSS57Q6UWY2 283 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 KRTAP1-3Q8IUG1 177 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 C20orf196Q8IYI0 205 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 LRRC17Q8N6Y2 441 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 TMEM255BQ8WV15 326 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 TMEM239Q8WW34 195 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 PERPQ96FX8 193 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 TXNDC15Q96J42 360 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 EMC6Q9BV81 110 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 CRLF2Q9HC73 371 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 SPAG4Q9NPE6 437 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 MED29Q9NX70 200 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 TAS2R5Q9NYW4 299 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 PLCE1Q9P212 2302 aa20.1■□□□□ 0.81
CAPN1-222ENST00000532285 FLNAP21333 2647 aaKnown RBP20.09■□□□□ 0.81
CAPN1-222ENST00000532285 ZNF682O95780 498 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 UMPSP11172 480 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 PTH2RP49190 550 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 RPS4XP62701 263 aaKnown RBP20.09■□□□□ 0.81
CAPN1-222ENST00000532285 ARF1P84077 181 aaKnown RBP20.09■□□□□ 0.81
CAPN1-222ENST00000532285 ST3GAL3Q11203 375 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 CARD17Q5XLA6 110 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 CBLL1Q75N03 491 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 VTCN1Q7Z7D3 282 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 PRRC1Q96M27 445 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 B3GAT2Q9NPZ5 323 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 ZNF701Q9NV72 531 aaPredicted RBP20.09■□□□□ 0.81
CAPN1-222ENST00000532285 FAIMQ9NVQ4 179 aa20.09■□□□□ 0.81
CAPN1-222ENST00000532285 A0A096LPE4 126 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 ARPC4-TTLL3A0A0A6YYG9 625 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 A0A1W2PPZ6 126 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 M0R3G1 203 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 RNF13O43567 381 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 SERPINI2O75830 405 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 IFNW1P05000 195 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 SOD3P08294 240 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 UGT2B15P54855 530 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 CEACAM16Q2WEN9 425 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 PGGHGQ32M88 737 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 Q5PR19 223 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 SLC46A3Q7Z3Q1 461 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 GEMIN6Q8WXD5 167 aaKnown RBP20.08■□□□□ 0.81
CAPN1-222ENST00000532285 ADAD1Q96M93 576 aaKnown RBP20.08■□□□□ 0.81
CAPN1-222ENST00000532285 LRRC37BQ96QE4 947 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 MOV10Q9HCE1 1003 aaKnown RBP20.08■□□□□ 0.81
CAPN1-222ENST00000532285 POU2F3Q9UKI9 436 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 A4GNTQ9UNA3 340 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 MED31Q9Y3C7 131 aa20.08■□□□□ 0.81
CAPN1-222ENST00000532285 ZNF99A8MXY4 864 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-222ENST00000532285 DCTN3O75935 186 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 SERPINA1P01009 418 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 IFNGR1P15260 489 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 SPOCK1Q08629 439 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 CAMK2DQ13557 499 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 IFI44LQ53G44 452 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 PHYHD1Q5SRE7 291 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 FKBP9P1Q75LS8 142 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 SLC35D2Q76EJ3 337 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 NANOGNBQ7Z5D8 188 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 OR6N1Q8NGY5 312 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 PFN4Q8NHR9 129 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 FAM162AQ96A26 154 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 ZNF837Q96EG3 531 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-222ENST00000532285 SGTBQ96EQ0 304 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 NELFAQ9H3P2 528 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 USF3Q68DE3 2245 aa20.07■□□□□ 0.8
CAPN1-222ENST00000532285 BLOC1S5-TXNDC5H3BN57 136 aa20.06■□□□□ 0.8
CAPN1-222ENST00000532285 OVOL3O00110 214 aa20.06■□□□□ 0.8
CAPN1-222ENST00000532285 OR7A10O76100 309 aa20.06■□□□□ 0.8
CAPN1-222ENST00000532285 FOSL1P15407 271 aa20.06■□□□□ 0.8
CAPN1-222ENST00000532285 FUT1P19526 365 aa20.06■□□□□ 0.8
CAPN1-222ENST00000532285 BIDP55957 195 aa20.06■□□□□ 0.8
CAPN1-222ENST00000532285 CCDC36Q8IYA8 594 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms