RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 NMNAT3Q96T66 252 aa14.27□□□□□ -0.12
PCDHA4-203ENST00000530339 USB1Q9BQ65 265 aaKnown RBP14.27□□□□□ -0.12
PCDHA4-203ENST00000530339 PLEK2Q9NYT0 353 aa14.27□□□□□ -0.12
PCDHA4-203ENST00000530339 HS3ST3A1Q9Y663 406 aa14.27□□□□□ -0.12
PCDHA4-203ENST00000530339 SCN7AQ01118 1682 aa14.27□□□□□ -0.12
PCDHA4-203ENST00000530339 GABARAPH6UMI1 98 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 SURF4O15260 269 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 SRMP19623 302 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 TMUB2Q71RG4 321 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 RBM45Q8IUH3 476 aaKnown RBP14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 OR56B1Q8NGI3 324 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 MARC2Q969Z3 335 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 OPALINQ96PE5 141 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 MN1Q10571 1320 aaPredicted RBP14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 H3BNC9 293 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 EFNA3P52797 238 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 ERVK-16P61578 105 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 PTCRAQ6ISU1 281 aaPredicted RBP14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 FRMD1Q8N878 549 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 SENP5Q96HI0 755 aaPredicted RBP14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 CNTRLQ7Z7A1 2325 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 A0A1B0GWA3 101 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 RAB19A4D1S5 217 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 CSF3P09919 207 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 CTHP32929 405 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 RPL23AP62750 156 aaKnown RBP14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 SLC14A1Q13336 389 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 WDR76Q9H967 626 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 STEAP1Q9UHE8 339 aa14.27□□□□□ -0.13
PCDHA4-203ENST00000530339 KDM4EB2RXH2 506 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 TNFSF4P23510 183 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ALKBH1Q13686 389 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 MIB2Q96AX9 1013 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 MCOLN1Q9GZU1 580 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 STARD5Q9NSY2 213 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 VDAC3Q9Y277 283 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ZNF705FA8MVS1 300 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 D6RAR5 112 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 KCNK2O95069 426 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 LGI1O95970 557 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 IGLV3-27P01718 113 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ZNF705DP0CH99 300 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ZNF705BP0CI00 300 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 GABRR1P24046 479 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 CCSMST1Q4G0I0 132 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 HEPHL1Q6MZM0 1159 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ABHD17CQ6PCB6 329 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 SEMA6CQ9H3T2 930 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 SLAMF7Q9NQ25 335 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 WIF1Q9Y5W5 379 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 GON4LQ3T8J9 2241 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 PHIPQ8WWQ0 1821 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 SLC5A10A0PJK1 596 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 GFYI3L273 518 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ZNF593O00488 134 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 EPHA1P21709 976 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 FKBP2P26885 142 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ECI1P42126 302 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 EVX1P49640 407 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 DEFA6Q01524 100 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 DPTQ07507 201 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 LPCAT3Q6P1A2 487 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 PAQR6Q6TCH4 344 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 OVCH1Q7RTY7 1134 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 TMEM200AQ86VY9 491 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 FRZBQ92765 325 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 FOXN4Q96NZ1 517 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 TCEAL2Q9H3H9 227 aaPredicted RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 PIGMQ9H3S5 423 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 SIT1Q9Y3P8 196 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 NME7Q9Y5B8 376 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 ARRDC5A6NEK1 342 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 CLDN20P56880 219 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 BAK1Q16611 211 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 TMEM201Q5SNT2 666 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 DPY19L4Q7Z388 723 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 MMP21Q8N119 569 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 OR51Q1Q8NH59 317 aa14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 DCLRE1CQ96SD1 692 aaKnown RBP14.26□□□□□ -0.13
PCDHA4-203ENST00000530339 SIX6O95475 246 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 CD53P19397 219 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 SFTPDP35247 375 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 SLC6A12P48065 614 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 ZNF136P52737 540 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 SEC61A1P61619 476 aaKnown RBP14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 DEFB133Q30KQ1 61 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 FAM111BQ6SJ93 734 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 PRSS45Q7RTY3 260 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 NKAIN3Q8N8D7 197 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 ACSM5Q6NUN0 579 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 CD300LGQ6UXG3 332 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 OR51D1Q8NGF3 324 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 C22orf15Q8WYQ4 148 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 SGCZQ96LD1 299 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 TMEM68Q96MH6 324 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 PRR14Q9BWN1 585 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 NMNAT2Q9BZQ4 307 aa14.25□□□□□ -0.13
PCDHA4-203ENST00000530339 SRRQ9GZT4 340 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms