RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 MAD2L1BPQ15013 274 aaPredicted RBP8.93□□□□□ -0.98
COPB1-207ENST00000529866 MAPK11Q15759 364 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 NKPD1Q17RQ9 610 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 COX20Q5RI15 118 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 CEP85LQ5SZL2 805 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 OGFOD2Q6N063 350 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 EPHX4Q8IUS5 362 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 ZNF440Q8IYI8 595 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 ANKFN1Q8N957 763 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 ANKRD42Q8N9B4 389 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 RNF217Q8TC41 542 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 TIMD4Q96H15 378 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 CCDC115Q96NT0 180 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 GPA33Q99795 319 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 SLC38A1Q9H2H9 487 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 CENPHQ9H3R5 247 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 WDR55Q9H6Y2 383 aaPredicted RBP8.93□□□□□ -0.98
COPB1-207ENST00000529866 SLC6A13Q9NSD5 602 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 ARMCX1Q9P291 453 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 MARCOQ9UEW3 520 aaPredicted RBP8.93□□□□□ -0.98
COPB1-207ENST00000529866 DUSP13Q9UII6 198 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 PRDM4Q9UKN5 801 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 RAB21Q9UL25 225 aa8.93□□□□□ -0.98
COPB1-207ENST00000529866 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.93□□□□□ -0.98
COPB1-207ENST00000529866 WNK2Q9Y3S1 2297 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 A0A096LPI6 279 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 PRSS51A0A1B0GVH4 220 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 DNAJC9-AS1A6NH13 148 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 AGAP5A6NIR3 686 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 ZNF99A8MXY4 864 aaPredicted RBP8.92□□□□□ -0.98
COPB1-207ENST00000529866 CLDN25C9JDP6 229 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 NAT2P11245 290 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 CD79AP11912 226 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 LBPP18428 481 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 CLDN17P56750 224 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 MVKQ03426 396 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 EPS8Q12929 822 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 STX3Q13277 289 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 MSMPQ1L6U9 139 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 GSG1Q2KHT4 349 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 CEACAM16Q2WEN9 425 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 PCGF3Q3KNV8 242 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 GTDC1Q4AE62 458 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 AVPI1Q5T686 147 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 C1orf140Q5VVS0 124 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 TMEM154Q6P9G4 183 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 DOK3Q7L591 496 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 MAVSQ7Z434 540 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 RETREG3Q86VR2 466 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 RNF130Q86XS8 419 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 SIGLECL1Q8N7X8 197 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 SYT14Q8NB59 555 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 PIK3C3Q8NEB9 887 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 PNPT1Q8TCS8 783 aaKnown RBP8.92□□□□□ -0.98
COPB1-207ENST00000529866 SNX33Q8WV41 574 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 SLC25A28Q96A46 364 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 GPR35Q9HC97 309 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 BTNL2Q9UIR0 455 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 FBXL3Q9UKT7 428 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 GPR45Q9Y5Y3 372 aa8.92□□□□□ -0.98
COPB1-207ENST00000529866 ZNF503-AS2A6NEH8 195 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 CDC14BO60729 498 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 SNNO75324 88 aaPredicted RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 AHSA1O95433 338 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 RAB36O95755 333 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 FSHBP01225 129 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 IGHV2-5P01817 119 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 HLA-HP01893 362 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 TFPTP0C1Z6 253 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 IL7RP16871 459 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 RPS4Y1P22090 263 aaKnown RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 EPHA3P29320 983 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 GCH1P30793 250 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 S100A3P33764 101 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 CHI3L1P36222 383 aaPredicted RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 ANXA11P50995 505 aaKnown RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 MVDP53602 400 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 BAMBIQ13145 260 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 C1DQ13901 141 aaKnown RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 ARMCX4Q5H9R4 360 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 WBP2NLQ6ICG8 309 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 SNX32Q86XE0 403 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 CADM2Q8N3J6 435 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 VPS37AQ8NEZ2 397 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 POP5Q969H6 163 aaKnown RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 LRRC58Q96CX6 371 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 DUX5Q96PT3 197 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 TRNT1Q96Q11 434 aaKnown RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 GAL3ST1Q99999 423 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 PAIP2Q9BPZ3 127 aaKnown RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 DENND2DQ9H6A0 471 aaPredicted RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 KCNK9Q9NPC2 374 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 HINT3Q9NQE9 182 aaKnown RBP8.91□□□□□ -0.98
COPB1-207ENST00000529866 SLC7A8Q9UHI5 535 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 FZR1Q9UM11 496 aa8.91□□□□□ -0.98
COPB1-207ENST00000529866 NUP214P35658 2090 aaPredicted RBP8.9□□□□□ -0.98
COPB1-207ENST00000529866 DSPPQ9NZW4 1301 aa8.9□□□□□ -0.98
COPB1-207ENST00000529866 IGHV1-69-2A0A0G2JMI3 117 aa8.9□□□□□ -0.98
COPB1-207ENST00000529866 TMEM120BA0PK00 339 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms