RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 KTI12Q96EK9 354 aaPredicted RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 OXGR1Q96P68 337 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 SORCS2Q96PQ0 1159 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 VRK1Q99986 396 aaPredicted RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 METTL17Q9H7H0 456 aaPredicted RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 TMEM27Q9HBJ8 222 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 MRGBPQ9NV56 204 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 TRAV36DV7A0A075B6V5 113 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 ARPC4-TTLL3A0A0A6YYG9 625 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 A0A1W2PR80 420 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 LRP5LA4QPB2 252 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 ZNF587BE7ETH6 402 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 TRIM77I1YAP6 450 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 AIM2O14862 343 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 FMO6PO60774 539 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 KRT33AO76009 404 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 ZNF432O94892 652 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 APEX1P27695 318 aaKnown RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 GTF2E2P29084 291 aaKnown RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SELENOPP49908 381 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SH3BGRP55822 239 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 OR1Q1Q15612 314 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SWI5Q1ZZU3 235 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 GLIPR1L2Q4G1C9 344 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 C9orf135Q5VTT2 229 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 NIPAL3Q6P499 406 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 KLHL24Q6TFL4 600 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 RINLQ6ZS11 566 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 H1FNTQ75WM6 255 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 COMTD1Q86VU5 262 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 PTOV1Q86YD1 416 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 ARMC8Q8IUR7 673 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SLC30A8Q8IWU4 369 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 FAM169BQ8N8A8 192 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 C11orf65Q8NCR3 313 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 OR1K1Q8NGR3 316 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 BCL2L2Q92843 193 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 TAAR8Q969N4 342 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SLC25A36Q96CQ1 311 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SLC41A3Q96GZ6 507 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 EPYCQ99645 322 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 CGREF1Q99674 301 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SOX7Q9BT81 388 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 TMEM43Q9BTV4 400 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 RBM4Q9BWF3 364 aaKnown RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 C1QTNF6Q9BXI9 259 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 SELENONQ9NZV5 590 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 B3GAT1Q9P2W7 334 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 CRNNQ9UBG3 495 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 FBXO9Q9UK97 447 aaPredicted RBP9.14□□□□□ -0.95
CPSF1-203ENST00000527916 ANGPT4Q9Y264 503 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 CORINQ9Y5Q5 1042 aa9.14□□□□□ -0.95
CPSF1-203ENST00000527916 IGKV1D-42A0A075B6H8 117 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 A0A0B4J2E0 115 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 A0A1B0GX12 115 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 MS4A18H0YCH9 400 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 M0QX08 132 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 ANGPT2O15123 496 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 TPST2O60704 377 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 LGI1O95970 557 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 ERCC1P07992 297 aaPredicted RBP9.13□□□□□ -0.95
CPSF1-203ENST00000527916 GIFP27352 417 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 DVL1P1P54792 670 aaPredicted RBP9.13□□□□□ -0.95
CPSF1-203ENST00000527916 RGS8P57771 180 aaPredicted RBP9.13□□□□□ -0.95
CPSF1-203ENST00000527916 NCALDP61601 193 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 SLC25A3Q00325 362 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 DEFA6Q01524 100 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 LGALS3BPQ08380 585 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 DUSP7Q16829 419 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 MS4A18Q3C1V0 323 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 TBRG1Q3YBR2 411 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 ANKRD16Q6P6B7 361 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 ZNF613Q6PF04 617 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 SHQ1Q6PI26 577 aaKnown RBP9.13□□□□□ -0.95
CPSF1-203ENST00000527916 LINC00114Q6XXX2 140 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 DEF8Q6ZN54 512 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 DHDDSQ86SQ9 333 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 RETREG3Q86VR2 466 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 RANBP3LQ86VV4 465 aaPredicted RBP9.13□□□□□ -0.95
CPSF1-203ENST00000527916 KDM8Q8N371 416 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 ANKS4BQ8N8V4 417 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 SCAIQ8N9R8 606 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 LRR1Q96L50 414 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 JMJD8Q96S16 334 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 RAB1BQ9H0U4 201 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 ZNF696Q9H7X3 374 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
CPSF1-203ENST00000527916 KLHL14Q9P2G3 628 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 SLC13A4Q9UKG4 626 aa9.13□□□□□ -0.95
CPSF1-203ENST00000527916 M0R082 166 aa9.12□□□□□ -0.95
CPSF1-203ENST00000527916 AKAP8O43823 692 aaKnown RBP9.12□□□□□ -0.95
CPSF1-203ENST00000527916 SLC43A1O75387 559 aa9.12□□□□□ -0.95
CPSF1-203ENST00000527916 UPK3AO75631 287 aa9.12□□□□□ -0.95
CPSF1-203ENST00000527916 NPPAP01160 153 aa9.12□□□□□ -0.95
CPSF1-203ENST00000527916 IGLV1-44P01699 117 aa9.12□□□□□ -0.95
CPSF1-203ENST00000527916 TACSTD2P09758 323 aa9.12□□□□□ -0.95
CPSF1-203ENST00000527916 CDH2P19022 906 aaPredicted RBP9.12□□□□□ -0.95
CPSF1-203ENST00000527916 GRPRP30550 384 aa9.12□□□□□ -0.95
CPSF1-203ENST00000527916 SERPINF1P36955 418 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms