RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 FOXD3Q9UJU5 478 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF346Q9UL40 294 aaKnown RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 TMCC3Q9ULS5 477 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 TMEM5Q9Y2B1 443 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 FASNP49327 2511 aaKnown RBP9.52□□□□□ -0.89
NEDD8-205ENST00000527046 CACNA1CQ13936 2221 aa9.52□□□□□ -0.89
NEDD8-205ENST00000527046 SLC35F4A4IF30 521 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 E9PQ18 207 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 GPR171O14626 319 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 IMPA2O14732 288 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 MSTNO14793 375 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 DEAF1O75398 565 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-205ENST00000527046 UPK3AO75631 287 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 CLDN14O95500 239 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 PLGP00747 810 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-205ENST00000527046 IGHMP01871 453 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF43P17038 809 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 AHCYP23526 432 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 FAM27E3Q08E93 113 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 DBPQ10586 325 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-205ENST00000527046 ACKR1Q16570 336 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 RFX4Q33E94 735 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 TMEM201Q5SNT2 666 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 EEF1A1P5Q5VTE0 462 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 ZFP1Q6P2D0 407 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 LRFN4Q6PJG9 635 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 RASSF6Q6ZTQ3 369 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 RRM2BQ7LG56 351 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 AAED1Q7RTV5 226 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 NANOGNBQ7Z5D8 188 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 LINC00471Q8N535 108 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 OR5K1Q8NHB7 308 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 ASB10Q8WXI3 467 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 HDAC2Q92769 488 aaKnown RBP9.51□□□□□ -0.89
NEDD8-205ENST00000527046 GTPBP3Q969Y2 492 aaKnown RBP9.51□□□□□ -0.89
NEDD8-205ENST00000527046 OR52D1Q9H346 318 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 PIGMQ9H3S5 423 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 EGLN3Q9H6Z9 239 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 SMURF2Q9HAU4 748 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 INIPQ9NRY2 104 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 IL20RAQ9UHF4 553 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 MGAT4BQ9UQ53 548 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 NOSIPQ9Y314 301 aaKnown RBP9.51□□□□□ -0.89
NEDD8-205ENST00000527046 ADAM18Q9Y3Q7 739 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 NOX1Q9Y5S8 564 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 PRR14LQ5THK1 2151 aa9.51□□□□□ -0.89
NEDD8-205ENST00000527046 DOPEY1Q5JWR5 2465 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 MYO18BQ8IUG5 2567 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 NPIPB13A6NJU9 1138 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 NPIPB4C9JG80 1138 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 GNGT2O14610 69 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 DVL2O14641 736 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 RNF13O43567 381 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 MITFO75030 526 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 MRPL33O75394 65 aaKnown RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 TXNDC12O95881 172 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 IGHV3-9P01782 118 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 HIST1H2ABP04908 130 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 SAGP10523 405 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 IGFBP2P18065 325 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 IGHV1-2P23083 117 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 EPHA2P29317 976 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 CCKARP32238 428 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 PCYT1AP49585 367 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF133P52736 654 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 CTXN1P60606 82 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 ERVK-25P63136 954 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 PPP2R2BQ00005 443 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 POU3F1Q03052 451 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 SNTB1Q13884 538 aaKnown RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 MELKQ14680 651 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 SLC25A35Q3KQZ1 300 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 ALG10Q5BKT4 473 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 KDM4DQ6B0I6 523 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF620Q6ZNG0 422 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 HIST3H2AQ7L7L0 130 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 LUZP2Q86TE4 346 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 UEVLDQ8IX04 471 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 MCEMP1Q8IX19 187 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 C20orf196Q8IYI0 205 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 CDK20Q8IZL9 346 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 PQLC1Q8N2U9 271 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 CLDN22Q8N7P3 220 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 OR6X1Q8NH79 312 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 ZNF519Q8TB69 540 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 CA5BP1Q8WTZ4 195 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 HIST1H2ACQ93077 130 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 TMEM54Q969K7 222 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 SAMD8Q96LT4 415 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 TSPAN32Q96QS1 320 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 SLC29A1Q99808 456 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 TACO1Q9BSH4 297 aaKnown RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 BDH2Q9BUT1 245 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 OSBPL10Q9BXB5 764 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 GABARAPL1Q9H0R8 117 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 TXNIPQ9H3M7 391 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 COQ3Q9NZJ6 369 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 NKX1-2Q9UD57 310 aaPredicted RBP9.5□□□□□ -0.89
NEDD8-205ENST00000527046 PROCRQ9UNN8 238 aa9.5□□□□□ -0.89
NEDD8-205ENST00000527046 RCE1Q9Y256 329 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms