RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 HPRP00739 348 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 HIST1H2ABP04908 130 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 INHBBP09529 407 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 ADORA3P0DMS8 318 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 TAS2R41P59536 307 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 LGALS3BPQ08380 585 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 HIST3H2AQ7L7L0 130 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 SLC15A3Q8IY34 581 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 C20orf196Q8IYI0 205 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 FBXL14Q8N1E6 418 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 HIST1H2ACQ93077 130 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 COX4I2Q96KJ9 171 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 HS6ST2Q96MM7 605 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 KCNS3Q9BQ31 491 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 ELAC2Q9BQ52 826 aaKnown RBP18.02■□□□□ 0.48
VPS28-206ENST00000526734 KATNB1Q9BVA0 655 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 C1QTNF6Q9BXI9 259 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 CRLF2Q9HC73 371 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 CMTM6Q9NX76 183 aa18.02■□□□□ 0.48
VPS28-206ENST00000526734 CRNNQ9UBG3 495 aaPredicted RBP18.02■□□□□ 0.48
VPS28-206ENST00000526734 CADP27708 2225 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 ZNF99A8MXY4 864 aaPredicted RBP18.01■□□□□ 0.47
VPS28-206ENST00000526734 AHCYP23526 432 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 PRDX6P30041 224 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 TTKP33981 857 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 SELENOWP63302 87 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 ARF1P84077 181 aaKnown RBP18.01■□□□□ 0.47
VPS28-206ENST00000526734 CEACAM16Q2WEN9 425 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 NHLRC1Q6VVB1 395 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 DEF8Q6ZN54 512 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 SLC38A2Q96QD8 506 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 PRSS27Q9BQR3 290 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 CBLN4Q9NTU7 201 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 USP22Q9UPT9 525 aa18.01■□□□□ 0.47
VPS28-206ENST00000526734 SLC35F4A4IF30 521 aa18■□□□□ 0.47
VPS28-206ENST00000526734 E7EQL1 145 aa18■□□□□ 0.47
VPS28-206ENST00000526734 LRRN3E7EW58 273 aa18■□□□□ 0.47
VPS28-206ENST00000526734 ENTPD5O75356 428 aa18■□□□□ 0.47
VPS28-206ENST00000526734 CH25HO95992 272 aa18■□□□□ 0.47
VPS28-206ENST00000526734 CRYAAP02489 173 aa18■□□□□ 0.47
VPS28-206ENST00000526734 MT-ND1P03886 318 aa18■□□□□ 0.47
VPS28-206ENST00000526734 BMP4P12644 408 aa18■□□□□ 0.47
VPS28-206ENST00000526734 HLA-DOBP13765 273 aa18■□□□□ 0.47
VPS28-206ENST00000526734 PTNP21246 168 aa18■□□□□ 0.47
VPS28-206ENST00000526734 LIPEQ05469 1076 aa18■□□□□ 0.47
VPS28-206ENST00000526734 SPOCK1Q08629 439 aa18■□□□□ 0.47
VPS28-206ENST00000526734 C8orf82Q6P1X6 216 aaPredicted RBP18■□□□□ 0.47
VPS28-206ENST00000526734 NANOGNBQ7Z5D8 188 aa18■□□□□ 0.47
VPS28-206ENST00000526734 TSPYL5Q86VY4 417 aaPredicted RBP18■□□□□ 0.47
VPS28-206ENST00000526734 OR6N1Q8NGY5 312 aa18■□□□□ 0.47
VPS28-206ENST00000526734 MYLK2Q9H1R3 596 aa18■□□□□ 0.47
VPS28-206ENST00000526734 NELFAQ9H3P2 528 aa18■□□□□ 0.47
VPS28-206ENST00000526734 MED29Q9NX70 200 aa18■□□□□ 0.47
VPS28-206ENST00000526734 RIMS3Q9UJD0 308 aa18■□□□□ 0.47
VPS28-206ENST00000526734 ATP23Q9Y6H3 246 aa18■□□□□ 0.47
VPS28-206ENST00000526734 MAP1AP78559 2803 aaPredicted RBP17.99■□□□□ 0.47
VPS28-206ENST00000526734 CD8AP01732 235 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 ASAH2BP0C7U1 165 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 UMPSP11172 480 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 FABP6P51161 128 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 SLC7A2P52569 658 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 ZNF627Q7L945 461 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 HDDC2Q7Z4H3 204 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 CPLX4Q7Z7G2 160 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 MUC15Q8N387 334 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 OR6X1Q8NH79 312 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 TPD52L3Q96J77 140 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 PRRC1Q96M27 445 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 ULBP2Q9BZM5 246 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 ACANP16112 2415 aa17.99■□□□□ 0.47
VPS28-206ENST00000526734 IGHV1-18A0A0C4DH31 117 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 H7C1Q1 480 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 M0R3G1 203 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 KPNA4O00629 521 aaPredicted RBP17.98■□□□□ 0.47
VPS28-206ENST00000526734 GSTA4O15217 222 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 SNX3O60493 162 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 IGKV3-15P01624 115 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 IGLV1-44P01699 117 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 CBR1P16152 277 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 LSP1P33241 339 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 ARR3P36575 388 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 CDKN1AP38936 164 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 CSNK1A1P48729 337 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 NUDT2P50583 147 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 SEC24CP53992 1094 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 CHRNB3Q05901 458 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 ST3GAL3Q11203 375 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 CARD17Q5XLA6 110 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 C11orf71Q6IPW1 123 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 B3GLCTQ6Y288 498 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 SLC35D2Q76EJ3 337 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 SLC46A3Q7Z3Q1 461 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 TREML1Q86YW5 311 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 TMEM239Q8WW34 195 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 LIPHQ8WWY8 451 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 NANOS1Q8WY41 292 aaKnown RBP17.98■□□□□ 0.47
VPS28-206ENST00000526734 EMC6Q9BV81 110 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 MEPEQ9NQ76 525 aaPredicted RBP17.98■□□□□ 0.47
VPS28-206ENST00000526734 TAS2R5Q9NYW4 299 aa17.98■□□□□ 0.47
VPS28-206ENST00000526734 POFUT2Q9Y2G5 429 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms