RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 FKRPQ9H9S5 495 aa19.31■□□□□ 0.68
VPS28-205ENST00000526204 SRA1Q9HD15 236 aaKnown RBP19.31■□□□□ 0.68
VPS28-205ENST00000526204 KLHL9Q9P2J3 617 aa19.31■□□□□ 0.68
VPS28-205ENST00000526204 RNF215Q9Y6U7 377 aa19.31■□□□□ 0.68
VPS28-205ENST00000526204 A0A1B0GVI7 797 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 ZNF432O94892 652 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 RPP14O95059 124 aaKnown RBP19.3■□□□□ 0.68
VPS28-205ENST00000526204 RENP00797 406 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 TACR3P29371 465 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 CCR9P51686 369 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 LTBQ06643 244 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 ZNF321PQ8N8H1 164 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 C7orf57Q8NEG2 295 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 GIMAP1Q8WWP7 306 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 ORAI1Q96D31 301 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 KTI12Q96EK9 354 aaPredicted RBP19.3■□□□□ 0.68
VPS28-205ENST00000526204 SLX1AQ9BQ83 275 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 OR8D2Q9GZM6 311 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 RAB33BQ9H082 229 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 SLCO1C1Q9NYB5 712 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 LAMP5Q9UJQ1 280 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 TMEM14AQ9Y6G1 99 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 ADRB1P08588 477 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 CD38P28907 300 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 DCAF7P61962 342 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 STAC2Q6ZMT1 411 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 C17orf82Q86X59 251 aaPredicted RBP19.3■□□□□ 0.68
VPS28-205ENST00000526204 FCAMRQ8WWV6 532 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 RLN3Q8WXF3 142 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 KLHL15Q96M94 604 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 ADOQ96SZ5 270 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 WDR76Q9H967 626 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 ZFP64Q9NPA5 681 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 CUTCQ9NTM9 273 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 FRRS1LQ9P0K9 344 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 ETV7Q9Y603 341 aa19.3■□□□□ 0.68
VPS28-205ENST00000526204 TRBV5-5A0A0J9YX44 114 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 C4orf47A7E2U8 309 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 HSPB2A8KAH6 182 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 KRT33AO76009 404 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 ABHD16AO95870 558 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 RAF1P04049 648 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 IGKV3-11P04433 115 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 CD27P26842 260 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 EGR3Q06889 387 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 HSPB2Q16082 182 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 FAM160A2Q8N612 972 aaPredicted RBP19.29■□□□□ 0.68
VPS28-205ENST00000526204 TSTD1Q8NFU3 115 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 ADIPOR1Q96A54 375 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 MVB12AQ96EY5 273 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 TSPAN32Q96QS1 320 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 TSPAN10Q9H1Z9 355 aaPredicted RBP19.29■□□□□ 0.68
VPS28-205ENST00000526204 MGAT4AQ9UM21 535 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 KLHDC2Q9Y2U9 406 aa19.29■□□□□ 0.68
VPS28-205ENST00000526204 DNAH14Q0VDD8 3507 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 IGHV1OR15-9A0A0B4J2B8 117 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 PEX14O75381 377 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 TPPPO94811 219 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 GPLD1P80108 840 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 MESTQ5EB52 335 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 PWWP2BQ6NUJ5 590 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 LRRN1Q6UXK5 716 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 ZNF687Q8N1G0 1237 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 HGDQ93099 445 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 C20orf85Q9H1P6 137 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 IGKV3D-11A0A0A0MRZ8 115 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 DCTN6O00399 190 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 ZNF593O00488 134 aaPredicted RBP19.28■□□□□ 0.68
VPS28-205ENST00000526204 PHYHO14832 338 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 PRAF2O60831 178 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 SULT1A3P0DMM9 295 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 SULT1A4P0DMN0 295 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 ART1P52961 327 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 ELFN2Q5R3F8 820 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 EEF1A1P5Q5VTE0 462 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 MTFR2Q6P444 385 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 TTLL10Q6ZVT0 673 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 OR6V1Q8N148 313 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 NSMAFQ92636 917 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 TAAR8Q969N4 342 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 GPR137Q96N19 417 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 COMMD4Q9H0A8 199 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 HRASLSQ9HDD0 168 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 OR5V1Q9UGF6 321 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 ZNF346Q9UL40 294 aaKnown RBP19.28■□□□□ 0.68
VPS28-205ENST00000526204 RCE1Q9Y256 329 aa19.28■□□□□ 0.68
VPS28-205ENST00000526204 HEATR5AQ86XA9 2040 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 A8MUA0 341 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 ERVH48-1M5A8F1 160 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 GPR171O14626 319 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 LDOC1O95751 146 aaPredicted RBP19.27■□□□□ 0.68
VPS28-205ENST00000526204 CXCL3P19876 107 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 MNDAP41218 407 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 MAGEB1P43366 347 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 ELAVL1Q15717 326 aaKnown RBP19.27■□□□□ 0.68
VPS28-205ENST00000526204 ST3GAL2Q16842 350 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 BMPERQ8N8U9 685 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 OR52I2Q8NH67 350 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 SYNPRQ8TBG9 265 aa19.27■□□□□ 0.68
VPS28-205ENST00000526204 ZNF721Q8TF20 911 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms