RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RRM2P31350 389 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 RPL4P36578 427 aaKnown RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 AQP2P41181 271 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 GUCA1AP43080 201 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 GPR4P46093 362 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 CAPZA2P47755 286 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF84P51523 738 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 BIDP55957 195 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 PRPS1P60891 318 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 RAP1BP61224 184 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 RAP1AP62834 184 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 VLDLRP98155 873 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 PRKCDQ05655 676 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 LTBQ06643 244 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 RPL18Q07020 188 aaKnown RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZP4Q12836 540 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 BNIP1Q12981 228 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 TOP3AQ13472 1001 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 TSC22D1Q15714 1073 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ALG10Q5BKT4 473 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ANKRD16Q6P6B7 361 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 PODNL1Q6PEZ8 512 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 TMEM108Q6UXF1 575 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC35D2Q76EJ3 337 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC46A3Q7Z3Q1 461 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 CDH24Q86UP0 819 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 TSPYL5Q86VY4 417 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 SPATA24Q86W54 205 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 EPHX4Q8IUS5 362 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 CCDC36Q8IYA8 594 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF295-AS1Q8N0V1 137 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 DEPDC4Q8N2C3 294 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 LINC00471Q8N535 108 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 LRRC17Q8N6Y2 441 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF433Q8N7K0 673 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 FAM86B1Q8N7N1 296 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZIC4Q8N9L1 334 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR4K5Q8NGD3 323 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR52N5Q8NH56 324 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR52J3Q8NH60 311 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 OR6X1Q8NH79 312 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 FNDC8Q8TC99 324 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 LIPHQ8WWY8 451 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 PLPPR2Q96GM1 343 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 SLC25A44Q96H78 314 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 C7orf34Q96L11 122 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 LRR1Q96L50 414 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ALPK1Q96QP1 1244 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 MMADHCQ9H3L0 296 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 REEP1Q9H902 201 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 CRLF2Q9HC73 371 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 OBP2BQ9NPH6 170 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 MEPEQ9NQ76 525 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 C20orf141Q9NUB4 165 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 MED29Q9NX70 200 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 B3GAT1Q9P2W7 334 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 MGAT4BQ9UQ53 548 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 POFUT2Q9Y2G5 429 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 FLNCQ14315 2725 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 USP9YO00507 2555 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 ARHGAP21Q5T5U3 1957 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 KIAA1549Q9HCM3 1950 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 HECTD1Q9ULT8 2610 aa4.76□□□□□ -1.65
HMGB1P40-201ENST00000525121 SPTAN1Q13813 2472 aaKnown RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 SPTBN1Q01082 2364 aaKnown RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TRAV27A0A087WT01 109 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 A0A087WUU8 490 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TRBV4-1A0A0J9YWV2 114 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 DHRS12A0PJE2 317 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 SH3PXD2BA1X283 911 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 UNC119BA6NIH7 251 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 NPIPB13A6NJU9 1138 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 AQP12BA6NM10 295 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF99A8MXY4 864 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 CENPBD1B2RD01 187 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 NPIPB4C9JG80 1138 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MS4A18H0YCH9 400 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 RPL36A-HNRNPH2H7BZ11 118 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 M0R1B8 84 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 TNFRSF11BO00300 401 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 EBAG9O00559 213 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 XKRYO14609 159 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 FFAR1O14842 300 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 E2F6O75461 281 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 UPK3AO75631 287 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 DIRAS1O95057 198 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 PRSS23O95084 383 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 NDUFB2O95178 105 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 FARS2O95363 451 aaKnown RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 HRGP04196 525 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 SEMG1P04279 462 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 F13BP05160 661 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 ITGA5P08648 1049 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 RAP2AP10114 183 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 HOXB1P14653 301 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 MAKP20794 623 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 DNASE1P24855 282 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 PTAFRP25105 342 aa4.75□□□□□ -1.65
HMGB1P40-201ENST00000525121 ZNF83P51522 516 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms