RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.31■■□□□ 1.32
COL13A1-213ENST00000520267 ZNF281Q9Y2X9 895 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 SIT1Q9Y3P8 196 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 CPED1A4D0V7 1026 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 SOX1O00570 391 aaPredicted RBP23.31■■□□□ 1.32
COL13A1-213ENST00000520267 SLC25A12O75746 678 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 TIAF1O95411 115 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 GPANK1O95872 356 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 RENP00797 406 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 RNF4P78317 190 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 GPR139Q6DWJ6 353 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 GUSBP11Q6P575 273 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 DMRTB1Q96MA1 342 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 NDEL1Q9GZM8 345 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 TGIF2Q9GZN2 237 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 SYT4Q9H2B2 425 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 MOV10Q9HCE1 1003 aaKnown RBP23.31■■□□□ 1.32
COL13A1-213ENST00000520267 BRD7Q9NPI1 651 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 ABRACLQ9P1F3 81 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 SRPK3Q9UPE1 567 aa23.31■■□□□ 1.32
COL13A1-213ENST00000520267 TMED7-TICAM2A0A0A6YYA0 188 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 ADAM10O14672 748 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 ARHGEF9O43307 516 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 UPK3AO75631 287 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 SRMP19623 302 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 SLC6A19Q695T7 634 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 GPR119Q8TDV5 335 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 DUSP19Q8WTR2 217 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 RELTQ969Z4 430 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 CTRCQ99895 268 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 TMED7Q9Y3B3 224 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 ZNF879B4DU55 563 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 EEF1E1O43324 174 aaKnown RBP23.3■■□□□ 1.32
COL13A1-213ENST00000520267 SUSD5O60279 629 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 AKR7A3O95154 331 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 PRKCAP17252 672 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 RPS27P42677 84 aaKnown RBP23.3■■□□□ 1.32
COL13A1-213ENST00000520267 POLR2HP52434 150 aaKnown RBP23.3■■□□□ 1.32
COL13A1-213ENST00000520267 CLDN20P56880 219 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 TATDN3Q17R31 274 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 EEF1A1P5Q5VTE0 462 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 PYHIN1Q6K0P9 492 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 ADGRG3Q86Y34 549 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 PM20D2Q8IYS1 436 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 GFI1Q99684 422 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 WDR76Q9H967 626 aa23.3■■□□□ 1.32
COL13A1-213ENST00000520267 DDX28Q9NUL7 540 aaKnown RBP23.3■■□□□ 1.32
COL13A1-213ENST00000520267 CACNA1EQ15878 2313 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 DHPSP49366 369 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-213ENST00000520267 AGFG1P52594 562 aaKnown RBP23.29■■□□□ 1.32
COL13A1-213ENST00000520267 GPR176Q14439 515 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 LIPNQ5VXI9 398 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 MAMDC2Q7Z304 686 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-213ENST00000520267 YIPF7Q8N8F6 280 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 OR6N2Q8NGY6 317 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 MAP6Q96JE9 813 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 SLC25A18Q9H1K4 315 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 A0A0C4DFX4 3053 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 ALPK2Q86TB3 2170 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 TOX3O15405 576 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-213ENST00000520267 ABHD16AO95870 558 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 PLGP00747 810 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-213ENST00000520267 TACSTD2P09758 323 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 KANSL1Q7Z3B3 1105 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 FAM220AQ7Z4H9 259 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 ANKRD37Q7Z713 158 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 PHYHIPQ92561 330 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 OR6C1Q96RD1 312 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 TSPAN10Q9H1Z9 355 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-213ENST00000520267 FSCN3Q9NQT6 498 aa23.29■■□□□ 1.32
COL13A1-213ENST00000520267 OR6C70A6NIJ9 312 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 ZNF354AO60765 605 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-213ENST00000520267 NPIPB7O75200 414 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 AHCYP23526 432 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 EPHA8P29322 1005 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-213ENST00000520267 YIF1BQ5BJH7 314 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 ESPNLQ6ZVH7 1005 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 KCTD20Q7Z5Y7 419 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 RABEPKQ7Z6M1 372 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 APCDD1LQ8NCL9 501 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 DERL3Q96Q80 235 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 ANKRD10Q9NXR5 420 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 TAS2R10Q9NYW0 307 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 LAMP5Q9UJQ1 280 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 ALG5Q9Y673 324 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 IGLV3-12A0A075B6K2 115 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 LY6G6EA0A0G2JKS1 128 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 HLA-DMAP28067 261 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 ZFP69Q49AA0 526 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 LYSMD4Q5XG99 296 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 THAP3Q8WTV1 239 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-213ENST00000520267 CAPSLQ8WWF8 208 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 MARVELD1Q9BSK0 173 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 U3KQA8 63 aa23.28■■□□□ 1.32
COL13A1-213ENST00000520267 EXPH5Q8NEV8 1989 aa23.27■■□□□ 1.32
COL13A1-213ENST00000520267 A0A1W2PQM1 296 aa23.27■■□□□ 1.32
COL13A1-213ENST00000520267 MT-ATP6P00846 226 aa23.27■■□□□ 1.32
COL13A1-213ENST00000520267 IFITM2Q01629 132 aa23.27■■□□□ 1.32
COL13A1-213ENST00000520267 ALKBH1Q13686 389 aaKnown RBP23.27■■□□□ 1.32
COL13A1-213ENST00000520267 SGCBQ16585 318 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms