RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 RORBQ92753 470 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 TSPAN17Q96FV3 270 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 THOC1Q96FV9 657 aaKnown RBP5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 CLPTM1LQ96KA5 538 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 BBS4Q96RK4 519 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 OSBPL9Q96SU4 736 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 CHP1Q99653 195 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 RSRP1Q9BUV0 290 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 SHCBP1LQ9BZQ2 653 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 SERHL2Q9H4I8 314 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 RANBP3Q9H6Z4 567 aaPredicted RBP5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 ZMAT4Q9H898 229 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 PFDN4Q9NQP4 134 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 CTPS2Q9NRF8 586 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 SCOCQ9UIL1 159 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 RNF11Q9Y3C5 154 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 MAB21L2Q9Y586 359 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 SMAD5-AS1Q9Y6J3 95 aa5.45□□□□□ -1.54
CTNNA1-216ENST00000519489 A0A087WV62 115 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 H3BUX3 64 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 SCDO00767 359 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 FCMRO60667 390 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 BCAS1O75363 584 aaPredicted RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 SLC43A1O75387 559 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 IGF2P01344 180 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 IGHV3-13P01766 116 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 PATE4P0C8F1 98 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 OR12D1P0DN82 309 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 TFPIP10646 304 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 RPS2P15880 293 aaKnown RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 MDH2P40926 338 aaKnown RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 ECI1P42126 302 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 PSMD4P55036 377 aaKnown RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 RPS23P62266 143 aaKnown RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 BASP1P80723 227 aaKnown RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 HOXA4Q00056 320 aaPredicted RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 MERTKQ12866 999 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 MPP2Q14168 576 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 CCNG2Q16589 344 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 PHYHD1Q5SRE7 291 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 FAM201AQ5SY85 155 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 WDR25Q64LD2 544 aaPredicted RBP5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 SULT1C3Q6IMI6 304 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 SLC27A4Q6P1M0 643 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 C18orf65Q6ZTR6 163 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 FRA10AC1Q70Z53 315 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 ADAMTSL2Q86TH1 951 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 ZNF575Q86XF7 245 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 EPHX4Q8IUS5 362 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 MISPQ8IVT2 679 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 TMEM99Q8N816 258 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 MAPKAPK5-AS1Q8N8E1 139 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 SPERTQ8NA61 448 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 PDPRQ8NCN5 879 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 OR5W2Q8NH69 310 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 PIFOQ8TCI5 191 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 SNX33Q8WV41 574 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 C1orf54Q8WWF1 131 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 MYDGFQ969H8 173 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 NABP2Q9BQ15 211 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 TMEM246Q9BRR3 403 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 CCDC106Q9BWC9 280 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 GPR61Q9BZJ8 451 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 NANOGQ9H9S0 305 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 KCNK9Q9NPC2 374 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 EQTNQ9NQ60 294 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 UBQLN4Q9NRR5 601 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 C20orf141Q9NUB4 165 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 GIN1Q9NXP7 522 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 PAK5Q9P286 719 aa5.44□□□□□ -1.54
CTNNA1-216ENST00000519489 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 A0A096LPK6 155 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 SHISA3A0PJX4 238 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 ZC3H12DA2A288 527 aaKnown RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 BTBD17A6NE02 478 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 AKR1B15C9JRZ8 316 aaPredicted RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 TMEM178BH3BS89 294 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 RPL36A-HNRNPH2H7BZ11 118 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 COQ9O75208 318 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 KRT33AO76009 404 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 KCNH1O95259 989 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 HTR3BO95264 441 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 JUNP05412 331 aaKnown RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 CD55P08174 381 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 ADH4P08319 380 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 IL3P08700 152 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 FBP1P09467 338 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 IVDP26440 423 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 TYK2P29597 1187 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 CAPZA2P47755 286 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 GIPRP48546 466 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 PITPNBP48739 271 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 SUMO3P55854 103 aaPredicted RBP5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 RWDD2BP57060 319 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 SNX1Q13596 522 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 DUSP5Q16690 384 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 ARHGAP11BQ3KRB8 267 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 LRIG3Q6UXM1 1119 aa5.43□□□□□ -1.54
CTNNA1-216ENST00000519489 UNQ9370/PRO34162Q6UXP9 181 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms