RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SELENOW	P63302	87 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	LTB	Q06643	244 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	HACD2	Q6Y1H2	254 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	DTX2	Q86UW9	622 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	TMEM123	Q8N131	208 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	BCL2L2	Q92843	193 aa	Predicted RBP	21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	TPD52L3	Q96J77	140 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	HS6ST2	Q96MM7	605 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	ZNF426	Q9BUY5	554 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	ATP23	Q9Y6H3	246 aa		21.15	■□□□□ 0.98
CNOT7-204	ENST00000518885	HTR3E	A5X5Y0	456 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	KPNA4	O00629	521 aa	Predicted RBP	21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	IGF2	P01344	180 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	CRYAA	P02489	173 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	INHBB	P09529	407 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	NUDT2	P50583	147 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	LIPE	Q05469	1076 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	LGALS3BP	Q08380	585 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	ZP4	Q12836	540 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	PGGHG	Q32M88	737 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	C20orf196	Q8IYI0	205 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	FAM169B	Q8N8A8	192 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	OR6N1	Q8NGY5	312 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	SLC38A2	Q96QD8	506 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	TRAF4	Q9BUZ4	470 aa	Predicted RBP	21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	FAM107B	Q9H098	131 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	RIMS3	Q9UJD0	308 aa		21.14	■□□□□ 0.97
CNOT7-204	ENST00000518885	SLC35F4	A4IF30	521 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	ZNF99	A8MXY4	864 aa	Predicted RBP	21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885		M0R3G1	203 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	RNF13	O43567	381 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	LYPD3	O95274	346 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	HPR	P00739	348 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	PRDX6	P30041	224 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	TTK	P33981	857 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	FABP6	P51161	128 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	ARF1	P84077	181 aa	Known RBP	21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	SLC25A3	Q00325	362 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	CEACAM16	Q2WEN9	425 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	WDR88	Q6ZMY6	472 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	HDDC2	Q7Z4H3	204 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	NANOGNB	Q7Z5D8	188 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	SLC15A3	Q8IY34	581 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	MUC15	Q8N387	334 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	KATNB1	Q9BVA0	655 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	CBLN4	Q9NTU7	201 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885	CMTM6	Q9NX76	183 aa		21.13	■□□□□ 0.97
CNOT7-204	ENST00000518885		A0A096LPE4	126 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885		A0A1W2PPZ6	126 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	GMNC	A6NCL1	334 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	LRRN3	E7EW58	273 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	C11orf98	E9PRG8	122 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	SERPINI2	O75830	405 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	MT-ND1	P03886	318 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	THY1	P04216	161 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	SLC7A2	P52569	658 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	CHRNB3	Q05901	458 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	ST3GAL3	Q11203	375 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	CARD17	Q5XLA6	110 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	LINGO2	Q7L985	606 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	TMEM239	Q8WW34	195 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	NANOS1	Q8WY41	292 aa	Known RBP	21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	ULBP2	Q9BZM5	246 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	MED29	Q9NX70	200 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	USP22	Q9UPT9	525 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	POFUT2	Q9Y2G5	429 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	ROS1	P08922	2347 aa		21.12	■□□□□ 0.97
CNOT7-204	ENST00000518885	ZNF469	Q96JG9	3925 aa	Predicted RBP	21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885		E7EQL1	145 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	GMNN	O75496	209 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	IFNW1	P05000	195 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	HLA-DOB	P13765	273 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	LSP1	P33241	339 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	ARR3	P36575	388 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	OR1E2	P47887	323 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	CSNK1A1	P48729	337 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	SEC24C	P53992	1094 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	SPOCK1	Q08629	439 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	SLC35D2	Q76EJ3	337 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	OR6X1	Q8NH79	312 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	PRRC1	Q96M27	445 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	PRSS27	Q9BQR3	290 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	EMC6	Q9BV81	110 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	MED31	Q9Y3C7	131 aa		21.11	■□□□□ 0.97
CNOT7-204	ENST00000518885	VSTM5	A8MXK1	200 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	CXCR6	O00574	342 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	SNX3	O60493	162 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	ASAH2B	P0C7U1	165 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	IFNGR1	P15260	489 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	TNFRSF1B	P20333	461 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	APOBEC3A	P31941	199 aa	Predicted RBP	21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	CDKN1A	P38936	164 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	CAPZA2	P47755	286 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	BID	P55957	195 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	PIN1	Q13526	163 aa	Predicted RBP	21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	CAMK2D	Q13557	499 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	IL17RD	Q8NFM7	739 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	GEMIN6	Q8WXD5	167 aa	Known RBP	21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	ZNF566	Q969W8	418 aa		21.1	■□□□□ 0.97
CNOT7-204	ENST00000518885	SGTB	Q96EQ0	304 aa		21.1	■□□□□ 0.97

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms