RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 MT-ATP6P00846 226 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MT-ND1P03886 318 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 THY1P04216 161 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FABP3P05413 133 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CRHP06850 196 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 H1F0P07305 194 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CHRM2P08172 466 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 STSP08842 583 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TSPAN19P0C672 248 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 RFPL3SP0C7P2 107 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FCGR2AP12318 317 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GP1BBP13224 206 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PPP3CBP16298 524 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 NCK1P16333 377 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TCN1P20061 433 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FASP25445 335 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ACVR2AP27037 513 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TACR3P29371 465 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IFNGR2P38484 337 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MAGEA5P43359 124 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SLC9A3P48764 834 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PCYT1AP49585 367 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LHX2P50458 406 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CCR4P51679 360 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZNF134P52741 427 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CTBP2P56545 445 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CLDN18P56856 261 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LOXL3P58215 753 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 B3GALT5-AS1P59052 145 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 RPS3AP61247 264 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 RPS4XP62701 263 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CSNK2A1P68400 391 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 VLDLRP98155 873 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CRYZQ08257 329 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ST3GAL3Q11203 375 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CCNIQ14094 377 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LY6DQ14210 128 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 HLXQ14774 488 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SLC10A1Q14973 349 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 KPNB1Q14974 876 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TRAM2Q15035 370 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PDK3Q15120 406 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GUSBP1Q15486 140 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OR1Q1Q15612 314 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 INPP5JQ15735 1006 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TOMM34Q15785 309 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CTU2Q2VPK5 515 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 NDUFAF6Q330K2 333 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 BEAN1Q3B7T3 259 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SOWAHCQ53LP3 525 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SYT14P1Q58G82 188 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ALG10BQ5I7T1 473 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 COLEC12Q5KU26 742 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ENTPD8Q5MY95 495 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PDSS1Q5T2R2 415 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FAM69AQ5T7M9 428 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 RAET1LQ5VY80 246 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 NSUN5P2Q63ZY6 315 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SP5Q6BEB4 398 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ABLIM2Q6H8Q1 611 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OR5M10Q6IEU7 315 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OR2T5Q6IEZ7 315 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PAQR6Q6TCH4 344 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ARSKQ6UWY0 536 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TMPPEQ6ZT21 453 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MBOAT2Q6ZWT7 520 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OLIG3Q7RTU3 272 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 KCTD20Q7Z5Y7 419 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TSEN54Q7Z6J9 526 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 VTCN1Q7Z7D3 282 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GGNQ86UU5 652 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LACC1Q8IV20 430 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZDHHC21Q8IVQ6 265 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 RNF113BQ8IZP6 322 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TMCO5AQ8N6Q1 288 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FAM86B1Q8N7N1 296 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CLDN22Q8N7P3 220 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SCAIQ8N9R8 606 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GATSQ8NAP1 163 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SMYD1Q8NB12 490 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OR4D11Q8NGI4 311 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OR2T29Q8NH02 315 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OR14L1PQ8NHC6 308 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MFSD8Q8NHS3 518 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MBD3L2Q8NHZ7 208 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZNF563Q8TA94 476 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FAM57AQ8TBR7 257 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SLC7A13Q8TCU3 470 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZPLD1Q8TCW7 415 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ADAMTS16Q8TE57 1224 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 RNF128Q8TEB7 428 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TMEM171Q8WVE6 324 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CANT1Q8WVQ1 401 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ACOT11Q8WXI4 607 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 DNAJC9Q8WXX5 260 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CNOT9Q92600 299 aaKnown RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ABTB1Q969K4 478 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CPNE4Q96A23 557 aaPredicted RBP1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MIB2Q96AX9 1013 aa1.96□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SARAFQ96BY9 339 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms