RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 PLPP3O14495 311 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPR171O14626 319 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF195O14628 629 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOSR2O14653 212 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRMT5O14744 637 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSD17B6O14756 317 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TNFSF11O14788 317 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TFECO14948 347 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPS12O15235 138 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SIVA1O15304 175 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP6V0E1O15342 81 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC16A4O15374 487 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC31A1O15431 190 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CRXO43186 299 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 MLNRO43193 412 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 B4GAT1O43505 415 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TNFSF12O43508 249 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SGCEO43556 437 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SNAI2O43623 268 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 XPNPEP2O43895 674 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TYROBPO43914 113 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CXCL13O43927 109 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDC40O60508 579 aaKnown RBP eCLIP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 UGT1A9O60656 530 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HPGDSO60760 199 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC19A2O60779 497 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TOM1O60784 492 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CTSVO60911 334 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ALOX12BO75342 701 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SH3BGRLO75368 114 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF189O75820 626 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRAPPC6AO75865 159 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CEACAM4O75871 244 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP5LO75964 103 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR7A10O76100 309 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SEMA3DO95025 777 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 DIRAS1O95057 198 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SCELO95171 688 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LYPD3O95274 346 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GJB5O95377 273 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TNFAIP8O95379 198 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLEKHA8P1O95397 391 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 BRI3O95415 125 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 DEXIO95424 95 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 BAG4O95429 457 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OXSR1O95747 527 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LSM8O95777 96 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ANGPTL1O95841 491 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NUDT14O95848 222 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TSPAN13O95857 204 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CD160O95971 181 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LALBAP00709 142 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HPP00738 406 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 F10P00742 488 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CA1P00915 261 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OAS1P00973 400 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TIMP1P01033 207 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 IFNA5P01569 189 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 JCHAINP01591 159 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHV2-5P01817 119 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHV4-39P01824 125 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 IGHV4-59P01825 116 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HLA-AP01891 365 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HBE1P02100 147 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TNNC2P02585 160 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 APOEP02649 317 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GAPDHP04406 335 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 IFNA6P05013 189 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LGALS2P05162 132 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 FGF1P05230 155 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL6P05231 212 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPLP0P05388 317 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 C2P06681 752 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 KLK1P06870 262 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RETP07949 1114 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TACSTD2P09758 323 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 H2AFZP0C0S5 128 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CTXN2P0C2S0 81 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CT62P0C5K7 136 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NHLRC4P0CG21 123 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM157CP0CG43 387 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOLGA8HP0CJ92 632 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PET100P0DJ07 73 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GIMD1P0DJR0 217 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 MYOGP15173 224 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NQO1P15559 274 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 MGMTP16455 207 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CTRB1P17538 263 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSMC3P17980 439 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPL35AP18077 110 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PGAM1P18669 254 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TBPP20226 339 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NPR2P20594 1047 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 COX5AP20674 150 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SERPINA2P20848 420 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 C4BPBP20851 252 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAGP20916 626 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP6V1B2P21281 511 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SYT1P21579 422 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 EDNRAP25101 427 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms