RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 MLXQ9UH92 298 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 hCG_1809904A0A1W2PP81 198 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 A0A1W2PPE2 198 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 A0A1W2PR64 198 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 A0A1W2PRV1 198 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 TNFRSF10CO14798 259 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 SNAPC5O75971 98 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 HSD17B1P14061 328 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 PRSS3P35030 304 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 HCCSP53701 268 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 SPATA46Q5T0L3 261 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 GARNL3Q5VVW2 1013 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 ALG12Q9BV10 488 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 ZMAT3Q9HA38 289 aaKnown RBP13.26□□□□□ -0.29
TRIO-222ENST00000515144 ACSS1Q9NUB1 689 aaPredicted RBP13.26□□□□□ -0.29
TRIO-222ENST00000515144 TRAV36DV7A0A075B6V5 113 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 PHC1P78364 1004 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 DCXRQ7Z4W1 244 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 SIMC1Q8NDZ2 872 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 SECTM1Q8WVN6 248 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 TAAR9Q96RI9 348 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 CMSS1Q9BQ75 279 aaKnown RBP13.26□□□□□ -0.29
TRIO-222ENST00000515144 SLC5A6Q9Y289 635 aa13.26□□□□□ -0.29
TRIO-222ENST00000515144 A0A1W2PR48 441 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 METTL12A8MUP2 240 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 PPM1DO15297 605 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 GM2AP17900 193 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 IDH3GP51553 393 aaPredicted RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 HIPK2Q9H2X6 1198 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 GMPR2Q9P2T1 348 aaKnown RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 PROCRQ9UNN8 238 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 ATG12O94817 140 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 TEX37Q96LM6 180 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 SORCS2Q96PQ0 1159 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 FUNDC2Q9BWH2 189 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 KLF13Q9Y2Y9 288 aaPredicted RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 A0A1B0GWA3 101 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 NKX6-3A6NJ46 265 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 ACOD1A6NK06 481 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 CDK2P24941 298 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 GDPD3Q7L5L3 318 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 SLC16A9Q7RTY1 509 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 NAXDQ8IW45 347 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 FBXL6Q8N531 539 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 ST7LQ8TDW4 575 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 PDLIM5Q96HC4 596 aaKnown RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 OR11A1Q9GZK7 315 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 C20orf27Q9GZN8 174 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 STEAP1Q9UHE8 339 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 GBF1Q92538 1859 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 RETP07949 1114 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 OPRD1P41143 372 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 HOXA1P49639 335 aaPredicted RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 PGGHGQ32M88 737 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 CNOT9Q92600 299 aaKnown RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 TFAP2CQ92754 450 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 ABCG5Q9H222 651 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 BORCS7-ASMTA0A0B4J1R7 106 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 EIF1P41567 113 aaKnown RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 GCNT2Q8N0V5 402 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 A0A1W2PR80 420 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 PATE3B3GLJ2 98 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 ZNF736B4DX44 427 aaPredicted RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 MCRIP1C9JLW8 97 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 CREBL2O60519 120 aaPredicted RBP13.25□□□□□ -0.29
TRIO-222ENST00000515144 CLEC3BP05452 202 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 OR7G1Q8NGA0 311 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 FGGYQ96C11 551 aa13.25□□□□□ -0.29
TRIO-222ENST00000515144 LMO7DNF2Z398 122 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 CHCHD4Q8N4Q1 142 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 BAHD1Q8TBE0 780 aaPredicted RBP13.24□□□□□ -0.29
TRIO-222ENST00000515144 MS4A6EQ96DS6 147 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 CLDN24A6NM45 220 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 EIF4EP06730 217 aaKnown RBP13.24□□□□□ -0.29
TRIO-222ENST00000515144 POU2F2P09086 479 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 DCUN1D4Q92564 292 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 RAB39BQ96DA2 213 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 SMIM3Q9BZL3 60 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 QPCTLQ9NXS2 382 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 CCDC187A0A096LP49 1063 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 IFNA7P01567 189 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 OR2G6Q5TZ20 316 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 OR51E2Q9H255 320 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 EMC7Q9NPA0 242 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 COA3Q9Y2R0 106 aaPredicted RBP13.24□□□□□ -0.29
TRIO-222ENST00000515144 GUSBP08236 651 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 TMEM244Q5VVB8 128 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 MRPL41Q8IXM3 137 aaKnown RBP13.24□□□□□ -0.29
TRIO-222ENST00000515144 TAS2R3Q9NYW6 316 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 HHLA2Q9UM44 414 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 ZC3H12DA2A288 527 aaKnown RBP13.24□□□□□ -0.29
TRIO-222ENST00000515144 FIGNL2A6NMB9 653 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 EIF1BO60739 113 aaKnown RBP13.24□□□□□ -0.29
TRIO-222ENST00000515144 IFNA4P05014 189 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 ITGB2P05107 769 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 P2RX1P51575 399 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 AADACL3Q5VUY0 350 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 NOX3Q9HBY0 568 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 TMEM45AQ9NWC5 275 aa13.24□□□□□ -0.29
TRIO-222ENST00000515144 SERTM1A2A2V5 107 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms