RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	CARD18	P57730	90 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	GPX6	P59796	221 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	YWHAG	P61981	247 aa	Known RBP eCLIP	3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RAB11A	P62491	216 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	FCN2	Q15485	313 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RAB11B	Q15907	218 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PRR30	Q53SZ7	412 aa	Predicted RBP	3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PPM1L	Q5SGD2	360 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C1orf146	Q5VVC0	180 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C1orf94	Q6P1W5	598 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CERS6	Q6ZMG9	384 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PRR22	Q8IZ63	422 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	LIX1	Q8N485	282 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	EID2	Q8N6I1	236 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TMEM252	Q8N6L7	170 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	FBXL13	Q8NEE6	735 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR10G3	Q8NGC4	313 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ANKRD49	Q8WVL7	239 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	KCTD14	Q9BQ13	255 aa	Predicted RBP	3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PELO	Q9BRX2	385 aa	Known RBP	3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PAXX	Q9BUH6	204 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RGCC	Q9H4X1	137 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	LYRM4	Q9HD34	91 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SAMSN1	Q9NSI8	373 aa	Known RBP	3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PAK5	Q9P286	719 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	BTNL2	Q9UIR0	455 aa		3.77	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	KBTBD11-OT1	A0A1B0GTJ5	212 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RBMY1B	A6NDE4	496 aa	Known RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RBMY1E	A6NEQ0	496 aa	Known RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	NDUFAB1	O14561	156 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MGRN1	O60291	552 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SERF1A	O75920	110 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SNAPIN	O95295	136 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ALDOB	P05062	364 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RBMY1D	P0C7P1	496 aa	Known RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RBMY1A1	P0DJD3	496 aa	Known RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PRKACA	P17612	351 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TCN1	P20061	433 aa	Predicted RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MSR1	P21757	451 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	BCKDHB	P21953	392 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CMA1	P23946	247 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MT3	P25713	68 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CASQ1	P31415	396 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RORA	P35398	523 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	GLP1R	P43220	463 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	BTD	P43251	543 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MRPL19	P49406	292 aa	Known RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SLC26A2	P50443	739 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	P2RY4	P51582	365 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CSNK1G2	P78368	415 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ITIH4	Q14624	930 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	XKR4	Q5GH76	650 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SOHLH1	Q5JUK2	328 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ATAD3C	Q5T2N8	411 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TMIGD1	Q6UXZ0	262 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TFAP2E	Q6VUC0	442 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PRSS41	Q7RTY9	318 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF677	Q86XU0	584 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	IQCK	Q8N0W5	287 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C6orf223	Q8N319	242 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ZNF557	Q8N988	423 aa	Predicted RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR10H4	Q8NGA5	316 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	RHEBL1	Q8TAI7	183 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR1E3	Q8WZA6	343 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	KIAA1143	Q96AT1	154 aa	Predicted RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	SMIM14	Q96QK8	99 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	GFRA4	Q9GZZ7	299 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	C20orf85	Q9H1P6	137 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	UXT	Q9UBK9	157 aa	Predicted RBP	3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CLN8	Q9UBY8	286 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	MMP24	Q9Y5R2	645 aa		3.76	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TRBV9	A0A0B4J1U6	114 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CDC7	O00311	574 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TRDMT1	O14717	391 aa	Known RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	EED	O75530	441 aa	Known RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	FGFR1OP	O95684	399 aa	Known RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	CLIC3	O95833	236 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	IGHV3-48	P01763	117 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	S100A9	P06702	114 aa	Known RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PLEK	P08567	350 aa	Predicted RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TPM1	P09493	284 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TUBG1	P23258	451 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ETV1	P50549	477 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	BCAP31	P51572	246 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	IRF8	Q02556	426 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	TGFBR3	Q03167	851 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PDIA2	Q13087	525 aa	Known RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	ATP6AP1	Q15904	470 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	HSDL1	Q3SXM5	330 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	BEX5	Q5H9J7	111 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	FAM220A	Q7Z4H9	259 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	VTCN1	Q7Z7D3	282 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	LHFPL3	Q86UP9	236 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PUSL1	Q8N0Z8	303 aa	Known RBP	3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PDIK1L	Q8N165	341 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	PDCL2	Q8N4E4	241 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR51S1	Q8NGJ8	323 aa		3.75	□□□□□ -1.81
CALCOCO2-222	ENST00000514006	OR9G4	Q8NGQ1	327 aa		3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms