RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ACTR6Q9GZN1 396 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 REEP1Q9H902 201 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 B3GAT1Q9P2W7 334 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 SLC7A8Q9UHI5 535 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 TESMINQ9Y4I5 508 aa8.09□□□□□ -1.11
NUP54-207ENST00000508583 CIB4A0PJX0 185 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 SH3PXD2BA1X283 911 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 C11orf98E9PRG8 122 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 MS4A18H0YCH9 400 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 C19orf84I3L1E1 186 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 TNFRSF11BO00300 401 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 GNGT2O14610 69 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 TRAF3IP2O43734 574 aaPredicted RBP8.08□□□□□ -1.12
NUP54-207ENST00000508583 OR10H3O60404 316 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 BCL10O95999 233 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 IGHG1P01857 330 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 FCGR1AP12314 374 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 COX5AP20674 150 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 PTNP21246 168 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 ARHGDIAP52565 204 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 LTBQ06643 244 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 RPL18Q07020 188 aaKnown RBP8.08□□□□□ -1.12
NUP54-207ENST00000508583 FAM27E3Q08E93 113 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 FAPQ12884 760 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 MS4A18Q3C1V0 323 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 ALG10Q5BKT4 473 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 OR2T5Q6IEZ7 315 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 KLHL24Q6TFL4 600 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 STAC2Q6ZMT1 411 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 BHLHA15Q7RTS1 189 aaPredicted RBP8.08□□□□□ -1.12
NUP54-207ENST00000508583 YTHDF3Q7Z739 585 aaKnown RBP8.08□□□□□ -1.12
NUP54-207ENST00000508583 CXorf67Q86X51 503 aaPredicted RBP8.08□□□□□ -1.12
NUP54-207ENST00000508583 EPHX4Q8IUS5 362 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 C17orf78Q8N4C9 275 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 ZIC4Q8N9L1 334 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 OR4K5Q8NGD3 323 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 OR2T29Q8NH02 315 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 OR52J3Q8NH60 311 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 OR6X1Q8NH79 312 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 FNDC8Q8TC99 324 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 MUCL1Q96DR8 90 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 ALPK1Q96QP1 1244 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 CHID1Q9BWS9 393 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 OBP2BQ9NPH6 170 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 INIPQ9NRY2 104 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 C20orf141Q9NUB4 165 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 SEC14L4Q9UDX3 406 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 PRSS50Q9UI38 385 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 EDARQ9UNE0 448 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 HIF3AQ9Y2N7 669 aa8.08□□□□□ -1.12
NUP54-207ENST00000508583 SAMHD1Q9Y3Z3 626 aaKnown RBP8.08□□□□□ -1.12
NUP54-207ENST00000508583 MAGED1Q9Y5V3 778 aaPredicted RBP8.08□□□□□ -1.12
NUP54-207ENST00000508583 FLNBO75369 2602 aaKnown RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 FREM1Q5H8C1 2179 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 TRBV4-1A0A0J9YWV2 114 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 TCRBV3S1A0A5B6 114 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 A6NIZ1 184 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 LRRN3E7EW58 273 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 CLOCKO15516 846 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 DEAF1O75398 565 aaPredicted RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 SERPINI2O75830 405 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 DIRAS1O95057 198 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 CCNB2O95067 398 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 CST1P01037 141 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 TSPAN19P0C672 248 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 IFNGR1P15260 489 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 DNAJA1P31689 397 aaKnown RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 RPL4P36578 427 aaKnown RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 GPR4P46093 362 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 CSNK1A1P48729 337 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 SELENOPP49908 381 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 HMGA2P52926 109 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 NR1H2P55055 460 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 RAP1BP61224 184 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 RPS4XP62701 263 aaKnown RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 RAP1AP62834 184 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 STK11Q15831 433 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 ZBED5Q49AG3 693 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 IQCCQ4KMZ1 466 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 TIMM23BQ5SRD1 257 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 TSPO2Q5TGU0 170 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 RPL13AP3Q6NVV1 102 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 SLC35D2Q76EJ3 337 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 ASRGL1Q7L266 308 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 TSEN54Q7Z6J9 526 aaKnown RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 CCDC36Q8IYA8 594 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 ADGRG5Q8IZF4 528 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 KDM8Q8N371 416 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 OR6N1Q8NGY5 312 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 CANT1Q8WVQ1 401 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 ZNF566Q969W8 418 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 SLC25A44Q96H78 314 aaPredicted RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 FAM46AQ96IP4 442 aaKnown RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 OR2M2Q96R28 347 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 SLC7A10Q9NS82 523 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 TAS2R5Q9NYW4 299 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 CRIM1Q9NZV1 1036 aa8.07□□□□□ -1.12
NUP54-207ENST00000508583 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.07□□□□□ -1.12
NUP54-207ENST00000508583 SLC35F4A4IF30 521 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms