RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ARPC3O15145 178 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 FABP7O15540 132 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 NUDT21O43809 227 aaKnown RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 DUX1O43812 170 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 POU3F3P20264 500 aaPredicted RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 ABCD3P28288 659 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 AFF3P51826 1226 aaKnown RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 PRPS1P60891 318 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 PLCXD2Q0VAA5 305 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 ELAVL1Q15717 326 aaKnown RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 SLC36A2Q495M3 483 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 PLXDC1Q8IUK5 500 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 KDM8Q8N371 416 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
DDX41-208ENST00000507955 ZFP3Q96NJ6 502 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 OR11A1Q9GZK7 315 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 SYT4Q9H2B2 425 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 FKRPQ9H9S5 495 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 HIF3AQ9Y2N7 669 aa13.16□□□□□ -0.3
DDX41-208ENST00000507955 CPED1A4D0V7 1026 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 PIN1P1O15428 100 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 OGG1O15527 345 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 ZFPL1O95159 310 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 SYPP08247 313 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 CD14P08571 375 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 NPR2P20594 1047 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 AHCYP23526 432 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 PITPNBP48739 271 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 TAS2R43P59537 309 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 HLA-DQA1Q5Y7H0 255 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
DDX41-208ENST00000507955 KRT74Q7RTS7 529 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 PRSS45Q7RTY3 260 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 SDR16C5Q8N3Y7 309 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 D2HGDHQ8N465 521 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 OR11H7Q8NGC8 314 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 OMA1Q96E52 524 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 WWTR1Q9GZV5 400 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 NOX4Q9NPH5 578 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 BRD7Q9NPI1 651 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 NUDT15Q9NV35 164 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 SLCO1C1Q9NYB5 712 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 MRPS17Q9Y2R5 130 aaKnown RBP13.15□□□□□ -0.3
DDX41-208ENST00000507955 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
DDX41-208ENST00000507955 GDF9O60383 454 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 FZD7O75084 574 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 CD3GP09693 182 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 PNMTP11086 282 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 GLB1P16278 677 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 GGTLC2Q14390 218 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 SHBQ15464 509 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 FAM209AQ5JX71 171 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 ZNF433Q8N7K0 673 aaPredicted RBP13.15□□□□□ -0.3
DDX41-208ENST00000507955 POMGNT2Q8NAT1 580 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.3
DDX41-208ENST00000507955 PMEPA1Q969W9 287 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 CCDC74AQ96AQ1 378 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 ZNF501Q96CX3 271 aaPredicted RBP13.15□□□□□ -0.3
DDX41-208ENST00000507955 MS4A3Q96HJ5 214 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 OR1F2PQ96R84 312 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 RAB33BQ9H082 229 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 DUSP15Q9H1R2 295 aaPredicted RBP13.15□□□□□ -0.3
DDX41-208ENST00000507955 SYNDIG1Q9H7V2 258 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 GRHPRQ9UBQ7 328 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 SLC6A5Q9Y345 797 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 CACNG2Q9Y698 323 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 CNTRLQ7Z7A1 2325 aa13.15□□□□□ -0.3
DDX41-208ENST00000507955 ARHGEF9O43307 516 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 GLCEO94923 617 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 EPXP11678 715 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 RBMS1P29558 406 aaKnown RBP13.14□□□□□ -0.31
DDX41-208ENST00000507955 ADH7P40394 386 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 P2RX3P56373 397 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 STARD6P59095 220 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 LGALS3BPQ08380 585 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 HES5Q5TA89 166 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 LRRC69Q6ZNQ3 347 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 Q7L0L9 218 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 DPY19L4Q7Z388 723 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 PM20D2Q8IYS1 436 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 DUSP19Q8WTR2 217 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 GFI1Q99684 422 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 PELOQ9BRX2 385 aaKnown RBP13.14□□□□□ -0.31
DDX41-208ENST00000507955 TBL1XR1Q9BZK7 514 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 GHITMQ9H3K2 345 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 RXFP3Q9NSD7 469 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 CXCR1P25024 350 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 UQCRC1P31930 480 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 GALNSP34059 522 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 SOX2P48431 317 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 EPHA4P54764 986 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 BTG1P62324 171 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 ACTA2P62736 377 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 ACTG2P63267 376 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 NTRK2Q16620 822 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 SERPINA12Q8IW75 414 aa13.14□□□□□ -0.31
DDX41-208ENST00000507955 TIGD4Q8IY51 512 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms