RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 TP53P04637 393 aaPredicted RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 ALPLP05186 524 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 YES1P07947 543 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 OSMP13725 252 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 AGTR1P30556 359 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 SLC6A6P31641 620 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 BIDP55957 195 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 ZP4Q12836 540 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 COX10Q12887 443 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 ACKR1Q16570 336 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 ANKDD1AQ495B1 522 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 SLC35F1Q5T1Q4 408 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 OGFRL1Q5TC84 451 aaPredicted RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 TMEM236Q5W0B7 351 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 TMEM211Q6ICI0 200 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 AAED1Q7RTV5 226 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 NUFIP2Q7Z417 695 aaKnown RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 PXKQ7Z7A4 578 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 CCDC71Q8IV32 467 aaPredicted RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 LRRC75AQ8NAA5 344 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 DNAJC9Q8WXX5 260 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 GMPPAQ96IJ6 420 aaPredicted RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 ZNF570Q96NI8 536 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 ERMAPQ96PL5 475 aaPredicted RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 TSPAN32Q96QS1 320 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 SF3B5Q9BWJ5 86 aaKnown RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 USE1Q9NZ43 259 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 Q9UFV3 132 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 TMEFF2Q9UIK5 374 aaPredicted RBP11.33□□□□□ -0.6
CDK7-204ENST00000506563 IER3IP1Q9Y5U9 82 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 DOCK7Q96N67 2140 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 ZNF462Q96JM2 2506 aa11.33□□□□□ -0.6
CDK7-204ENST00000506563 TEX13CA0A0J9YWL9 993 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 A0A1B0GUH1 482 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 ZNF726A6NNF4 738 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 GPR171O14626 319 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 TRAF3IP2O43734 574 aaPredicted RBP11.32□□□□□ -0.6
CDK7-204ENST00000506563 SS18L1O75177 396 aaPredicted RBP11.32□□□□□ -0.6
CDK7-204ENST00000506563 SMNDC1O75940 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDK7-204ENST00000506563 IGHV3-9P01782 118 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 CD14P08571 375 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 TSPAN19P0C672 248 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 CDH2P19022 906 aaPredicted RBP11.32□□□□□ -0.6
CDK7-204ENST00000506563 NOS3P29474 1203 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 TIMP3P35625 211 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 ACVR1BP36896 505 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 SELENOPP49908 381 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 SLC16A1P53985 500 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 CRISP1P54107 249 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 RAD23AP54725 363 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 CAMK2DQ13557 499 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 GINS1Q14691 196 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 PDK3Q15120 406 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 RIPPLY2Q5TAB7 128 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 RPL13AP3Q6NVV1 102 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 VWA1Q6PCB0 445 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 CD300LDQ6UXZ3 194 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 ZNF100Q8IYN0 542 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 ZIC4Q8N9L1 334 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 RND1Q92730 232 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 RASD2Q96D21 266 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 Q96M85 177 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 DMRTA2Q96SC8 542 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 VCXQ9H320 206 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 GRHPRQ9UBQ7 328 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 ZNF346Q9UL40 294 aaKnown RBP11.32□□□□□ -0.6
CDK7-204ENST00000506563 ESPL1Q14674 2120 aa11.32□□□□□ -0.6
CDK7-204ENST00000506563 PHF3Q92576 2039 aaKnown RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 IGKV3D-15A0A087WSY6 115 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 SLC35F4A4IF30 521 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 HSPB2A8KAH6 182 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 ZNF724A8MTY0 619 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 H7C1C5 153 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 AKAP8O43823 692 aaKnown RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 MRPL33O75394 65 aaKnown RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 SNAP29O95721 258 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 BMP5P22003 454 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 EDNRAP25101 427 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 CTSSP25774 331 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 EPHA2P29317 976 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 CEACAM8P31997 349 aaPredicted RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 POLR2IP36954 125 aaKnown RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 PTDSS1P48651 473 aaKnown RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
CDK7-204ENST00000506563 LCN6P62502 163 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 LGALS3BPQ08380 585 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 POU4F3Q15319 338 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 HSPB2Q16082 182 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 DPY19L2P2Q6ZN68 376 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 FAM214BQ7L5A3 538 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 WDFY1Q8IWB7 410 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 UBE2J2Q8N2K1 259 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 PARP8Q8N3A8 854 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 CLDN22Q8N7P3 220 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 OR2T33Q8NG76 320 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
CDK7-204ENST00000506563 ASB10Q8WXI3 467 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms