RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 LAT2Q9GZY6 243 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF281Q9Y2X9 895 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 TMEM221A6NGB7 291 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 M0R296 226 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 HSPA12AO43301 675 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-207ENST00000504761 STARP49675 285 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 C21orf58P58505 322 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 RPS18P62269 152 aaKnown RBP12.87□□□□□ -0.35
TCOF1-207ENST00000504761 CDNFQ49AH0 187 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 CORO6Q6QEF8 472 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ESPNLQ6ZVH7 1005 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 FAM57BQ71RH2 274 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 KCTD9Q7L273 389 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 NANOGP1Q8N7R0 232 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 SPTSSAQ969W0 71 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 GIMAP5Q96F15 307 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 FER1L6-AS2Q96M78 137 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 SLC6A7Q99884 636 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 FBXL3Q9UKT7 428 aa12.87□□□□□ -0.35
TCOF1-207ENST00000504761 ISPDA4D126 451 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 CYR61O00622 381 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 IL1AP01583 271 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ERCC1P07992 297 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 CD40LGP29965 261 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 DMWDQ09019 674 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 FCRLAQ7L513 359 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ELP5Q8TE02 316 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 URM1Q9BTM9 101 aaKnown RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ENKD1Q9H0I2 346 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 C13orf42A0A1B0GVH6 325 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 A0A1W2PQ09 198 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 RPS19P39019 145 aaKnown RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SLC35A1P78382 337 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SMCO1Q147U7 214 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 PRSS53Q2L4Q9 553 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF321PQ8N8H1 164 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 LRFN1Q9P244 771 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 NPIPB8E9PQR5 432 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 TNFSF14O43557 240 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 PRSS23O95084 383 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 APOC1P02654 83 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 NPR2P20594 1047 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 PTPN6P29350 595 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SOX18P35713 384 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 EIF1P41567 113 aaKnown RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SLC22A6Q4U2R8 563 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 LIPNQ5VXI9 398 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ARHGDIGQ99819 225 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 WDR76Q9H967 626 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ACOXLQ9NUZ1 547 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SCP2D1Q9UJQ7 156 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 MOKQ9UQ07 419 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SLCO1B1Q9Y6L6 691 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 A0A1B0GTQ1 180 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 WRBO00258 174 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 UPK1BO75841 260 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 GLCEO94923 617 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 SPI1P17947 270 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 PSG6Q00889 435 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 MRPL49Q13405 166 aaKnown RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ATXN7L3Q14CW9 347 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 NKPD1Q17RQ9 610 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 OR13C9Q8NGT0 318 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 CDC6Q99741 560 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 DUSP15Q9H1R2 295 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-207ENST00000504761 C1orf198Q9H425 327 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 NOX4Q9NPH5 578 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF639Q9UID6 485 aa12.86□□□□□ -0.35
TCOF1-207ENST00000504761 BDP1A6H8Y1 2624 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 SPTAN1Q13813 2472 aaKnown RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 FFAR1O14842 300 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 FOXS1O43638 330 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 RPL27P61353 136 aaKnown RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 PRKCDQ05655 676 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 MALLQ13021 153 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 TMEM244Q5VVB8 128 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 DTWD2Q8NBA8 298 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 PIGQQ9BRB3 760 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 CST11Q9H112 138 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 SESN1Q9Y6P5 492 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 IGHV3-15A0A0B4J1V0 119 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 FAM230AA0A1W2PPH8 454 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 GPX5O75715 221 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 PAHP00439 452 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
TCOF1-207ENST00000504761 HBMQ6B0K9 141 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 USP51Q70EK9 711 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 DCXRQ7Z4W1 244 aa12.85□□□□□ -0.35
TCOF1-207ENST00000504761 RDH10Q8IZV5 341 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms