RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RIMKLAQ8IXN7 391 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF440Q8IYI8 595 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 CADM2Q8N3J6 435 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 KIR3DL3Q8N743 410 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 DEFB108BQ8NET1 73 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 OR4A15Q8NGL6 344 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 SLC25A36Q96CQ1 311 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 OXGR1Q96P68 337 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 CITED1Q99966 193 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 DPY30Q9C005 99 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 LEF1Q9UJU2 399 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 PURGQ9UJV8 347 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 FBXL3Q9UKT7 428 aa13.44□□□□□ -0.26
PDLIM7-210ENST00000503827 A0A096LPI6 279 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 ISPDA4D126 451 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 M0R3G1 203 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 AHSA1O95433 338 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 CLPTM1O96005 669 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 KLF3P57682 345 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 COPZ1P61923 177 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 RAB1AP62820 205 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 MRPL2Q5T653 305 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 WBP2NLQ6ICG8 309 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 OR4F3Q6IEY1 312 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF813Q6ZN06 617 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 FNDC5Q8NAU1 212 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 MFSD8Q8NHS3 518 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 SYNPRQ8TBG9 265 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 MRI1Q9BV20 369 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 SAP30LQ9HAJ7 183 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 SLCO1C1Q9NYB5 712 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 UBAP1Q9NZ09 502 aa13.43□□□□□ -0.26
PDLIM7-210ENST00000503827 RNASET2O00584 256 aaKnown RBP13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 PLIN3O60664 434 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 MT-ND5P03915 603 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 FGF4P08620 206 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 UQCRC2P22695 453 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 GIPRP48546 466 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF154Q13106 437 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 C6orf136Q5SQH8 315 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 ZCCHC23Q6ZST2 131 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 STK35Q8TDR2 534 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 ELMOD3Q96FG2 381 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 TSPAN32Q96QS1 320 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 OR2M2Q96R28 347 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 RBM4BQ9BQ04 359 aaKnown RBP13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 MMP26Q9NRE1 261 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 POFUT2Q9Y2G5 429 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 CACNG2Q9Y698 323 aa13.42□□□□□ -0.26
PDLIM7-210ENST00000503827 TANC2Q9HCD6 1990 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 IGLV3-9A0A075B6K5 115 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 PRAMEF27A3QJZ7 478 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 TMEM233B4DJY2 109 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 NPIPB7O75200 414 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 UBL3O95164 117 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 GPANK1O95872 356 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 CRYBA1P05813 215 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 DBIP07108 87 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 GKN3PP0CG01 181 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 SLC3A1Q07837 685 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 CAMK2DQ13557 499 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 RAB39AQ14964 217 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 MOGQ16653 247 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 TSTQ16762 297 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 UGT3A2Q3SY77 523 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 PHYHD1Q5SRE7 291 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 OLFML2AQ68BL7 652 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 RHOUQ7L0Q8 258 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 TMEM123Q8N131 208 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 IFT81Q8WYA0 676 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 CCL17Q92583 94 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 TRNT1Q96Q11 434 aaKnown RBP13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 SLC38A1Q9H2H9 487 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 B3GAT2Q9NPZ5 323 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 B3GAT1Q9P2W7 334 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 MARCOQ9UEW3 520 aaPredicted RBP13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 TBK1Q9UHD2 729 aa13.41□□□□□ -0.26
PDLIM7-210ENST00000503827 A0A1W2PPM1 405 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 FTCDNL1E5RQL4 147 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 CPSF4O95639 269 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ABHD2P08910 425 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 FAM157BP0CG42 384 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 B4GALT1P15291 398 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF250P15622 560 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 ZNF12P17014 697 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 RPS4Y1P22090 263 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 CHI3L1P36222 383 aaPredicted RBP13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 RPS5P46782 204 aaKnown RBP13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 CCT5P48643 541 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 RAG2P55895 527 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 CLDN8P56748 225 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 MFSD13AQ14CX5 517 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 CHI3L2Q15782 390 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 SYPL1Q16563 259 aa13.4□□□□□ -0.26
PDLIM7-210ENST00000503827 XKR7Q5GH72 579 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms