RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 CCNB1IP1Q9NPC3 277 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SERINC1Q9NRX5 453 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 INIPQ9NRY2 104 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 KLHL13Q9P2N7 655 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 DKK4Q9UBT3 224 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CLEC2DQ9UHP7 191 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 KLHL21Q9UJP4 597 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 EXOGQ9Y2C4 368 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 KLF13Q9Y2Y9 288 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC6A5Q9Y345 797 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 HDGFL3Q9Y3E1 203 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 RPL36Q9Y3U8 105 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CORINQ9Y5Q5 1042 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 SPIN1Q9Y657 262 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 CEPT1Q9Y6K0 416 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 COMMD3-BMI1R4GMX3 469 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PIEZO1Q92508 2521 aa6.18□□□□□ -1.42
TOPBP1-203ENST00000503464 PHF3Q92576 2039 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 NPIPB13A6NJU9 1138 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 AQP7P3A6NL99 342 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 NPIPB4C9JG80 1138 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 PRR23D1E9PI22 279 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TNFSF11O14788 317 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SMAD9O15198 467 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 RNF13O43567 381 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TRAF3IP2O43734 574 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SERPINI2O75830 405 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SEC14L2O76054 403 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 IGHA1P01876 353 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TFP02787 698 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 HIST1H2ABP04908 130 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ITGB2P05107 769 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 LIMS3P0CW19 117 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 LIMS4P0CW20 117 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 PRR23D2P0DMB1 279 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 CD46P15529 392 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF3P17036 446 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SPI1P17947 270 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 PYCR1P32322 319 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TGFBR2P37173 567 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 MTNR1AP48039 350 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 LHX2P50458 406 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ETV1P50549 477 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SLC25A1P53007 311 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 CLDN18P56856 261 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 OR2B6P58173 313 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 RPL27P61353 136 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TLE3Q04726 772 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 RAB40BQ12829 278 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 GGTLC2Q14390 218 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TOMM20Q15388 145 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 EMC4Q5J8M3 183 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SYT6Q5T7P8 510 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 UBE2UQ5VVX9 321 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 RNLSQ5VYX0 342 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 GPR139Q6DWJ6 353 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 LEG1Q6P5S2 330 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 CCDC81Q6ZN84 652 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 MEPCEQ7L2J0 689 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 HIST3H2AQ7L7L0 130 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 GID4Q8IVV7 300 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 STX19Q8N4C7 294 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 RFLNBQ8N5W9 214 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ARIH2OSQ8N7S6 290 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 FAM98AQ8NCA5 519 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ZNF485Q8NCK3 441 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 OR51L1Q8NGJ5 315 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SMAP2Q8WU79 429 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ASB10Q8WXI3 467 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SMPDL3BQ92485 455 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 HIST1H2ACQ93077 130 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 WNT2BQ93097 391 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 MYDGFQ969H8 173 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 NMD3Q96D46 503 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TMEM80Q96HE8 168 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TXNDC15Q96J42 360 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 KLHL15Q96M94 604 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 SFXN2Q96NB2 322 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 OR5M11Q96RB7 305 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 UCN2Q96RP3 112 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TEAD3Q99594 435 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 JAM3Q9BX67 310 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 NAA50Q9GZZ1 169 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 OR51V1Q9H2C8 321 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TXNIPQ9H3M7 391 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ADGRL4Q9HBW9 690 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ASB6Q9NWX5 421 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 MED29Q9NX70 200 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 VSX1Q9NZR4 365 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 DIMT1Q9UNQ2 313 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 TRAPPC4Q9Y296 219 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 B3GALT5Q9Y2C3 310 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 PTPRQQ9UMZ3 2332 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 CACNA1GO43497 2377 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 ANKRD11Q6UB99 2663 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 IGF2RP11717 2491 aa6.17□□□□□ -1.42
TOPBP1-203ENST00000503464 DMXL2Q8TDJ6 3036 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms