RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PNPT1Q8TCS8 783 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 FAM216AQ8WUB2 273 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CKAP2Q8WWK9 683 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 RDH5Q92781 318 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC47A1Q96FL8 570 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM19Q96HH6 336 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 PKNOX2Q96KN3 472 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 PPP1R36Q96LQ0 422 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 JMJD8Q96S16 334 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM43Q9BTV4 400 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SPATA5L1Q9BVQ7 753 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF416Q9BWM5 594 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 C1orf198Q9H425 327 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM38AQ9H6F2 299 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 CRLF2Q9HC73 371 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 B3GAT2Q9NPZ5 323 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC6A13Q9NSD5 602 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 PNPOQ9NVS9 261 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 MRPL39Q9NYK5 338 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 NKIRAS2Q9NYR9 191 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 REV1Q9UBZ9 1251 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC7A8Q9UHI5 535 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 METRNQ9UJH8 293 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF346Q9UL40 294 aaKnown RBP5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 NOX1Q9Y5S8 564 aa5.26□□□□□ -1.57
LSM3P4-201ENST00000502948 IGKV1D-42A0A075B6H8 117 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 A0A096LPE4 126 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 TRAV20A0A0B4J274 112 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 A0A0B4J2E0 115 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 A0A1B0GX12 115 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 A0A1W2PPZ6 126 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM89A2RUT3 159 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 WDR91A4D1P6 747 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 LRP5LA4QPB2 252 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF503-AS2A6NEH8 195 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 PRORSD1PA6NEY8 169 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 M0R082 166 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 CLIC1O00299 241 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 IGF2P01344 180 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 SERPINA5P05154 406 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 MSMBP08118 114 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 CELA3BP08861 270 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ADRA2AP08913 450 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ARAFP10398 606 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 IFNGR1P15260 489 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 GPX2P18283 190 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 GATA3P23771 443 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 EPHA3P29320 983 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 GRPRP30550 384 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 IL2RGP31785 369 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 LIMS1P48059 325 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 POLR2JP52435 117 aaKnown RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 HILS1P60008 231 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 LGALS3BPQ08380 585 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ZP4Q12836 540 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 C1DQ13901 141 aaKnown RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 MOGQ16653 247 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 TUSC1Q2TAM9 212 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 TRMT5Q32P41 509 aaKnown RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 PCGF3Q3KNV8 242 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ELFN2Q5R3F8 820 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ATG16L1Q676U5 607 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 HMGN2P46Q86SG4 172 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 MDP1Q86V88 176 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 MYPOPQ86VE0 399 aaPredicted RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 KRT73Q86Y46 540 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 MIER2Q8N344 545 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 SVOPLQ8N434 492 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 SGMS2Q8NHU3 365 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF417Q8TAU3 575 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 STON2Q8WXE9 905 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 GTF2H4Q92759 462 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 TAAR8Q969N4 342 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 TMEM186Q96B77 213 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 SLC25A36Q96CQ1 311 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 KTI12Q96EK9 354 aaPredicted RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 DNAJA3Q96EY1 480 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF587Q96SQ5 575 aaPredicted RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 MRPL37Q9BZE1 423 aaKnown RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 PAIP1Q9H074 479 aaKnown RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 WDR55Q9H6Y2 383 aaPredicted RBP5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 DYNLRB1Q9NP97 96 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 ZNF224Q9NZL3 707 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 KLHL14Q9P2G3 628 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 RPS6KB2Q9UBS0 482 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 GPR160Q9UJ42 338 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 RAB21Q9UL25 225 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 CORO2BQ9UQ03 480 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 GRIP1Q9Y3R0 1128 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 TANC2Q9HCD6 1990 aa5.25□□□□□ -1.57
LSM3P4-201ENST00000502948 PPIAL4EA0A075B759 164 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 TRBV5-3A0A0A0MS03 114 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 PPIAL4CA0A0B4J2A2 164 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 A0A1B0GWA3 101 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 FAM157AC9JC47 383 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 PPIAL4DF5H284 164 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 J3QLI3 93 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 UBDO15205 165 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ICMTO60725 284 aa5.24□□□□□ -1.57
LSM3P4-201ENST00000502948 ERLIN1O75477 346 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms