RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 THEM4Q5T1C6 240 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 C9orf135Q5VTT2 229 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 REEP3Q6NUK4 255 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 ULK3Q6PHR2 472 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 METTL7BQ6UX53 244 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 CCNI2Q6ZMN8 369 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 ZNF730Q6ZMV8 503 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 LRRC74BQ6ZQY2 392 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLC35D2Q76EJ3 337 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 FAM122BQ7Z309 247 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 HDDC2Q7Z4H3 204 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 DCXRQ7Z4W1 244 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SLC35F2Q8IXU6 374 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 BOD1L2Q8IYS8 172 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 CCDC185Q8N715 623 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 INO80EQ8NBZ0 244 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 SMRP1Q8NCR6 262 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 OR2T12Q8NG77 320 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 FAM76AQ8TAV0 307 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 NUBPLQ8TB37 319 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 PLPPR1Q8TBJ4 325 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 ACOT11Q8WXI4 607 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 UBE2E3Q969T4 207 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 PNPLA2Q96AD5 504 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 FAM131CQ96AQ9 280 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 OPALINQ96PE5 141 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 CNN2Q99439 309 aaKnown RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 LXNQ9BS40 222 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 DRC3Q9H069 523 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 RACGAP1Q9H0H5 632 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 OR51M1Q9H341 326 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 BEX1Q9HBH7 125 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 NANSQ9NR45 359 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 IL36RNQ9UBH0 155 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 CLEC2DQ9UHP7 191 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 PURGQ9UJV8 347 aaKnown RBP3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 NUP50Q9UKX7 468 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 WIPI2Q9Y4P8 454 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 URGCP-MRPS24S4R325 110 aa3.72□□□□□ -1.81
HMGB1P21-201ENST00000502313 USP34Q70CQ2 3546 aa3.71□□□□□ -1.81
HMGB1P21-201ENST00000502313 GOLGA8IPA6NC78 632 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 LRIT2A6NDA9 550 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 PP2D1A8MPX8 630 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 PRAMEF26H0Y7S4 382 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 EI24O14681 340 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 AIM2O14862 343 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 TFECO14948 347 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 PSTPIP1O43586 416 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CHST1O43916 411 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CNOT3O75175 753 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 KHDRBS3O75525 346 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CDC123O75794 336 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 RBBP9O75884 186 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ERLIN2O94905 339 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ETHE1O95571 254 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CST4P01036 141 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 RPN2P04844 631 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 IFNW1P05000 195 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 RPSAP08865 295 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 H2BFMP0C1H6 154 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 FAM157CP0CG43 387 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 POLR2EP19388 210 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 IDSP22304 550 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 GABRR2P28476 465 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 C21orf33P30042 268 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ACVRL1P37023 503 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC26A3P40879 764 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 PEX3P56589 373 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 SEC61A1P61619 476 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 GNG11P61952 73 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 MYL7Q01449 175 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 DR1Q01658 176 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 MGAT3Q09327 533 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF155Q12901 538 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CALCOCO2Q13137 446 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 FADDQ13158 208 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 RBMS2Q15434 407 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ISXQ2M1V0 245 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 SMUG1Q53HV7 270 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 C1orf220Q5T0J3 134 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 C10orf25Q5T742 122 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 DDI2Q5TDH0 399 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF691Q5VV52 312 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 MORN5Q5VZ52 161 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 RHBDF2Q6PJF5 856 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC25A47Q6Q0C1 308 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 Q6ZSR3 168 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF621Q6ZSS3 439 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC26A9Q7LBE3 791 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 PIM3Q86V86 326 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC26A11Q86WA9 606 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 KMT5CQ86Y97 462 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 PLD3Q8IV08 490 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 DCP1BQ8IZD4 617 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 PGBD5Q8N414 524 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 TRAM1L1Q8N609 369 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR10A7Q8NGE5 316 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 C8orf46Q8TAG6 207 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CAPSLQ8WWF8 208 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 MYDGFQ969H8 173 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms