RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TAAR3PQ9P1P4 343 aa13.28□□□□□ -0.28
HDAC6-236ENST00000498808 IGHV1-69-2A0A0G2JMI3 117 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 PRSS51A0A1B0GVH4 220 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 CDHR4A6H8M9 788 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 CLDN25C9JDP6 229 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 COPEO14579 308 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 TRAF3IP2O43734 574 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 NPHS1O60500 1241 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 FZD7O75084 574 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 DBIP07108 87 aaKnown RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 PRG2P13727 222 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 ARRB2P32121 409 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 CHI3L1P36222 383 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 RAD52P43351 418 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 RPS5P46782 204 aaKnown RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 EGR4Q05215 589 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 SRSF4Q08170 494 aaKnown RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 MMEL1Q495T6 779 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 KLF17Q5JT82 389 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 ATG16L1Q676U5 607 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF813Q6ZN06 617 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF836Q6ZNA1 936 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 USP51Q70EK9 711 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF771Q7L3S4 317 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF627Q7L945 461 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 RNF130Q86XS8 419 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 VRK2Q86Y07 508 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 WDFY1Q8IWB7 410 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 DEFB108BQ8NET1 73 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 MGARPQ8TDB4 240 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 TUBGCP3Q96CW5 907 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 SLC35A5Q9BS91 424 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 DPY30Q9C005 99 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 MTHFD2LQ9H903 347 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 HINT3Q9NQE9 182 aaKnown RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 NKIRAS2Q9NYR9 191 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 PDP1Q9P0J1 537 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-236ENST00000498808 SLC7A8Q9UHI5 535 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 MID2Q9UJV3 735 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 NUP50Q9UKX7 468 aa13.27□□□□□ -0.29
HDAC6-236ENST00000498808 IGLV3-9A0A075B6K5 115 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 A0A096LPI6 279 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 CLDN34H7C241 214 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 B4GALT1P15291 398 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 ALDH3A1P30838 453 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 AQP5P55064 265 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 RAB1AP62820 205 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 EMX2Q04743 252 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 C1DQ13901 141 aaKnown RBP13.26□□□□□ -0.29
HDAC6-236ENST00000498808 CASP8Q14790 479 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 RAB39AQ14964 217 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 MFSD13AQ14CX5 517 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 MAPK11Q15759 364 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 CARD17Q5XLA6 110 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 RGS7BPQ6MZT1 257 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-236ENST00000498808 TMEM154Q6P9G4 183 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 RETREG3Q86VR2 466 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF584Q8IVC4 421 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 C20orf196Q8IYI0 205 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 C17orf53Q8N3J3 647 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-236ENST00000498808 GTF3AQ92664 365 aaKnown RBP13.26□□□□□ -0.29
HDAC6-236ENST00000498808 POP5Q969H6 163 aaKnown RBP13.26□□□□□ -0.29
HDAC6-236ENST00000498808 SLC25A28Q96A46 364 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 KTI12Q96EK9 354 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-236ENST00000498808 GPA33Q99795 319 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 GAL3ST1Q99999 423 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 MECRQ9BV79 373 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 ASIC5Q9NY37 505 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 PLEK2Q9NYT0 353 aa13.26□□□□□ -0.29
HDAC6-236ENST00000498808 M0R082 166 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 RAB36O95755 333 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 OMGP23515 440 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 GTF2E2P29084 291 aaKnown RBP13.25□□□□□ -0.29
HDAC6-236ENST00000498808 COPZ1P61923 177 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 TEKQ02763 1124 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 MAD2L1Q13257 205 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-236ENST00000498808 SLC9A3R2Q15599 337 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 ARMCX4Q5H9R4 360 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 C4orf33Q8N1A6 199 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 FGFBP3Q8TAT2 258 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF417Q8TAU3 575 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF587Q96SQ5 575 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-236ENST00000498808 DENND2DQ9H6A0 471 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-236ENST00000498808 MMP26Q9NRE1 261 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 NOP53Q9NZM5 478 aaKnown RBP13.25□□□□□ -0.29
HDAC6-236ENST00000498808 LEF1Q9UJU2 399 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-236ENST00000498808 PRDM4Q9UKN5 801 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 CHST2Q9Y4C5 530 aa13.25□□□□□ -0.29
HDAC6-236ENST00000498808 PPIAL4EA0A075B759 164 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 PPIAL4CA0A0B4J2A2 164 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 PPIAL4DF5H284 164 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 AKAP8O43823 692 aaKnown RBP13.24□□□□□ -0.29
HDAC6-236ENST00000498808 PATE4P0C8F1 98 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 FAM157BP0CG42 384 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 PPIAL4FP0DN26 164 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 NR2F1P10589 423 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 ZNF250P15622 560 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 KRT4P19013 534 aa13.24□□□□□ -0.29
HDAC6-236ENST00000498808 ATP4BP51164 291 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms