RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 SRYQ05066 204 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 SLC10A7Q0GE19 358 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 PPP1R8Q12972 351 aaKnown RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GRB7Q14451 532 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 RSPO1Q2MKA7 263 aaPredicted RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 PARP6Q2NL67 630 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 SMU1Q2TAY7 513 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 ACSF3Q4G176 576 aaPredicted RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 AARDQ4LEZ3 155 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GLRA4Q5JXX5 417 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 HECTD3Q5T447 861 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 KCTD9Q7L273 389 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 PRSS41Q7RTY9 318 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 LRRC70Q7Z2Q7 622 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 P4HA3Q7Z4N8 544 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GALNTL5Q7Z4T8 443 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 PRSS42Q7Z5A4 293 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GOLGA7Q7Z5G4 137 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GLRX5Q86SX6 157 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GPBP1Q86WP2 473 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 SYCP3Q8IZU3 236 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 TMCO5AQ8N6Q1 288 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 LEMD2Q8NC56 503 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 LPCAT1Q8NF37 534 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 NEK11Q8NG66 645 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 OR4A16Q8NH70 328 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 FIBINQ8TAL6 211 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GDAP1Q8TB36 358 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 BCL2L2Q92843 193 aaPredicted RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 TIMD4Q96H15 378 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 ZMAT2Q96NC0 199 aaKnown RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 NAP1L3Q99457 506 aaPredicted RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 STACQ99469 402 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 WRAP53Q9BUR4 548 aaKnown RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 ERVK-6Q9BXR3 956 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 CACNG6Q9BXT2 260 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 FTHL17Q9BXU8 183 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 NFKBIZQ9BYH8 718 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 NACA2Q9H009 215 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 ABCG4Q9H172 646 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 C11orf49Q9H6J7 331 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 RPAP3Q9H6T3 665 aaPredicted RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 GRPEL1Q9HAV7 217 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 NOX3Q9HBY0 568 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 COMMD8Q9NX08 183 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 TERF2IPQ9NYB0 399 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 DNAJB9Q9UBS3 223 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 ZNF490Q9ULM2 529 aaPredicted RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 EIF3LQ9Y262 564 aaKnown RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 SNX5Q9Y5X3 404 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 DLG5Q8TDM6 1919 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 TRPM1Q7Z4N2 1603 aa0.38□□□□□ -2.35
SGMS1-205ENST00000498514 RRBP1Q9P2E9 1410 aaKnown RBP0.38□□□□□ -2.35
SGMS1-205ENST00000498514 E9PCH4 1651 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 IQGAP2Q13576 1575 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 DOCK6Q96HP0 2047 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 PLEKHH1Q9ULM0 1364 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ECM29Q5VYK3 1845 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 WNK3Q9BYP7 1800 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 TRBV2A0A0J9YWF9 115 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 LOC100131303A0A0U1RQF7 123 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 A4D1N5 150 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 LOC730098B7Z3J9 87 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 H3BTX0 84 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 MBTPS2O43462 519 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 NDUFA7O95182 113 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ADRA2AP08913 450 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ICAM2P13598 275 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 GNSP15586 552 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ATP5A1P25705 553 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CTNNA1P35221 906 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 COPB2P35606 906 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CXCL5P42830 114 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SLC6A8P48029 635 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 NOVA1P51513 510 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CCL11P51671 97 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SMSP52788 366 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 PLK1P53350 603 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 TAS2R19P59542 299 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 OSTNP61366 133 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 RPL8P62917 257 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 MRPS6P82932 125 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 MYBPC1Q00872 1141 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 GALK2Q01415 458 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 BDH1Q02338 343 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CHRNB3Q05901 458 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SIGLEC14Q08ET2 396 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ZP4Q12836 540 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 BAMBIQ13145 260 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 BTG3Q14201 252 aaPredicted RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 RCN2Q14257 317 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SLMAPQ14BN4 828 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 UBE2V2Q15819 145 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 CARTPTQ16568 116 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 HNRNPA1L2Q32P51 320 aaKnown RBP0.37□□□□□ -2.35
SGMS1-205ENST00000498514 ATF7IP2Q5U623 682 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 IL23RQ5VWK5 629 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 PRAMEF8Q5VWM4 474 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 SCYL2Q6P3W7 929 aa0.37□□□□□ -2.35
SGMS1-205ENST00000498514 LEG1Q6P5S2 330 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms