RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CHI3L1P36222 383 aaPredicted RBP1.74□□□□□ -2.13
SMC4-227ENST00000497984 CASP4P49662 377 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 FGF8P55075 233 aaPredicted RBP1.74□□□□□ -2.13
SMC4-227ENST00000497984 SPIBQ01892 262 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 ACVR1Q04771 509 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 KLRB1Q12918 225 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 PRSS8Q16651 343 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 TTLL9Q3SXZ7 439 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 SLC36A3Q495N2 470 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 TMEM225Q6GV28 225 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 C1orf94Q6P1W5 598 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 ZNF880Q6PDB4 577 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 NEGR1Q7Z3B1 354 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 PLA2G4DQ86XP0 818 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 SLC38A6Q8IZM9 456 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 MYOCDQ8IZQ8 938 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 OR10G4Q8NGN3 311 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 MAIP1Q8WWC4 291 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 CTNNBL1Q8WYA6 563 aaPredicted RBP1.74□□□□□ -2.13
SMC4-227ENST00000497984 LRRC58Q96CX6 371 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 OXGR1Q96P68 337 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 LRRN3Q9H3W5 708 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 COQ10BQ9H8M1 238 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 SPATA7Q9P0W8 599 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 RNF14Q9UBS8 474 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 CD84Q9UIB8 345 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 MRPS33Q9Y291 106 aaKnown RBP1.74□□□□□ -2.13
SMC4-227ENST00000497984 POLDIP2Q9Y2S7 368 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 ITGB4P16144 1822 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 MN1Q10571 1320 aaPredicted RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 IGHV5-51A0A0C4DH38 117 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 TCRBV9S1A1TA0A576 114 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 RGS16O15492 202 aaPredicted RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 TBX19O60806 448 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 UPK3AO75631 287 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 OXSR1O95747 527 aaPredicted RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 OPN1MWP04001 364 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 UBTFL1P0CB47 393 aaPredicted RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 OPN1MW2P0DN77 364 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 OPN1MW3P0DN78 364 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 EPB41P11171 864 aaKnown RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 CCDC130P13994 396 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 NPY1RP25929 384 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 LAP3P28838 519 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 RPL13AP40429 203 aaKnown RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 QARSP47897 775 aaKnown RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 REG3AQ06141 175 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 FZD2Q14332 565 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 DUSP7Q16829 419 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 COX19Q49B96 90 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 TTC23Q5W5X9 447 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 FBXW9Q5XUX1 488 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 FAM92BQ6ZTR7 304 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 UTS2BQ765I0 119 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 PEX26Q7Z412 305 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 ANKFN1Q8N957 763 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 FAM133AQ8N9E0 248 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 DNAJC19Q96DA6 116 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 TSSK3Q96PN8 268 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 THUMPD2Q9BTF0 503 aaKnown RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 TPPP3Q9BW30 176 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 LY9Q9HBG7 655 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 MRPL47Q9HD33 250 aaKnown RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 UFSP2Q9NUQ7 469 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.73□□□□□ -2.134e-98■■■■■ 943.1
SMC4-227ENST00000497984 HOXC10Q9NYD6 342 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 TIMM10BQ9Y5J6 103 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 F11RQ9Y624 299 aaKnown RBP1.73□□□□□ -2.13
SMC4-227ENST00000497984 FRMPD3Q5JV73 1810 aa1.73□□□□□ -2.13
SMC4-227ENST00000497984 NFASCO94856 1347 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 KIF16BQ96L93 1317 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 HSD17B6O14756 317 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 MED7O43513 233 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 SCGNO76038 276 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 VAMP5O95183 116 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 CNR1P21554 472 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 GNA11P29992 359 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 GDI1P31150 447 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 OPRD1P41143 372 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 RGS4P49798 205 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 CBX1P83916 185 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 OR5I1Q13606 314 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 STK11Q15831 433 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 HSP90AA5PQ58FG0 334 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 C10orf120Q5SQS8 335 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 PRR9Q5T870 116 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 LCN12Q6JVE5 192 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 ZADH2Q8N4Q0 377 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 IPMKQ8NFU5 416 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 RGP1Q92546 391 aaPredicted RBP1.72□□□□□ -2.13
SMC4-227ENST00000497984 SENP8Q96LD8 212 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 WFIKKN1Q96NZ8 548 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 CLCC1Q96S66 551 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 CCT7Q99832 543 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 ZNF629Q9UEG4 869 aaPredicted RBP1.72□□□□□ -2.13
SMC4-227ENST00000497984 LAMP5Q9UJQ1 280 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 RFNGQ9Y644 331 aa1.72□□□□□ -2.13
SMC4-227ENST00000497984 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
SMC4-227ENST00000497984 A0A1W2PP18 115 aa1.71□□□□□ -2.14
SMC4-227ENST00000497984 RGSL1A5PLK6 1076 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms