RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 DUSP21Q9H596 190 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 ALG9Q9H6U8 611 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 NANOGQ9H9S0 305 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 LMAN1LQ9HAT1 526 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 TM9SF3Q9HD45 589 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 NLE1Q9NVX2 485 aaPredicted RBP3.12□□□□□ -1.91
TRIM4-205ENST00000496896 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
TRIM4-205ENST00000496896 ANKMY1Q9P2S6 941 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 B4GALT7Q9UBV7 327 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 WARS2Q9UGM6 360 aaKnown RBP3.12□□□□□ -1.91
TRIM4-205ENST00000496896 CELA1Q9UNI1 258 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 SAMD4AQ9UPU9 718 aaKnown RBP3.12□□□□□ -1.91
TRIM4-205ENST00000496896 PIN4Q9Y237 131 aaKnown RBP3.12□□□□□ -1.91
TRIM4-205ENST00000496896 EIF3LQ9Y262 564 aaKnown RBP3.12□□□□□ -1.91
TRIM4-205ENST00000496896 NSG2Q9Y328 171 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 IFT52Q9Y366 437 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 MFHAS1Q9Y4C4 1052 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 CPQQ9Y646 472 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 SHROOM3Q8TF72 1996 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 PLXNB2O15031 1838 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 FER1L5A0AVI2 2057 aa3.12□□□□□ -1.91
TRIM4-205ENST00000496896 PLXNA3P51805 1871 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PTPRDP23468 1912 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 DOCK4Q8N1I0 1966 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TRBV5-4A0A0C4DH59 114 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 C1orf232A0A0U1RR37 186 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 A0A1B0GTH9 108 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 LOC100130705A0A1B0GUX0 176 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 A0A1W2PQ72 361 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 FAM92AA1XBS5 289 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 EVPLLA8MZ36 301 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CENPBD1B2RD01 187 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SUPT3HB4E1H0 165 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 LOC110117498-PIK3R3F6TDL0 507 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 M0QZ92 97 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 HAS3O00219 553 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 UPK1AO00322 258 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 UBFD1O14562 309 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 GNGT2O14610 69 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 AQP9O43315 295 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 DFNA5O60443 496 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 BCAS1O75363 584 aaPredicted RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SNAP29O95721 258 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SEMA4FO95754 770 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CST1P01037 141 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SERPINF2P08697 491 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 GNAO1P09471 354 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TRAPPC2P0DI81 140 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TRAPPC2BP0DI82 140 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PRPS2P11908 318 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PCMT1P22061 227 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PPIBP23284 216 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PTAFRP25105 342 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TIA1P31483 386 aaKnown RBP eCLIP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 EPHX2P34913 555 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 HPCAL1P37235 193 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 ETV6P41212 452 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 KRT6CP48668 564 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TRPC1P48995 793 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 EIF2B2P49770 351 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 RGS4P49798 205 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PLA2G16P53816 162 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CDKN2DP55273 166 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 BTG1P62324 171 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 RPP38P78345 283 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PRKCDQ05655 676 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CNTN1Q12860 1018 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF235Q14590 738 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SPCS2Q15005 226 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TAF1AQ15573 450 aaPredicted RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 NEDD8Q15843 81 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PPP1R3AQ16821 1122 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PLPP4Q5VZY2 271 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 WSCD1Q658N2 575 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 LEMD1Q68G75 181 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CLEC6AQ6EIG7 209 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SULT1C3Q6IMI6 304 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 ZNF770Q6IQ21 691 aaPredicted RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CAPN13Q6MZZ7 669 aaPredicted RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SLC27A4Q6P1M0 643 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SHQ1Q6PI26 577 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 PIWIL3Q7Z3Z3 882 aaKnown RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TAC4Q86UU9 113 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TCAIMQ8N3R3 496 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 ARL10Q8N8L6 244 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 FNDC5Q8NAU1 212 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 CHDHQ8NE62 594 aaPredicted RBP3.11□□□□□ -1.91
TRIM4-205ENST00000496896 KLHL30-AS1Q8NEE0 82 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 OR9I1Q8NGQ6 314 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 OR6F1Q8NGZ6 308 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 OR4L1Q8NH43 312 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SETD6Q8TBK2 473 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 DYNC2LI1Q8TCX1 351 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 UBTD2Q8WUN7 234 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 C17orf50Q8WW18 174 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 ITLN1Q8WWA0 313 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 SLC13A3Q8WWT9 602 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 TMBIM1Q969X1 311 aa3.11□□□□□ -1.91
TRIM4-205ENST00000496896 RFT1Q96AA3 541 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms