RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 THAP7Q9BT49 309 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-215ENST00000496447 ZDHHC5Q9C0B5 715 aa12.14□□□□□ -0.47
PTPRF-215ENST00000496447 ERVMER34-1Q9H9K5 563 aa12.14□□□□□ -0.47
PTPRF-215ENST00000496447 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
PTPRF-215ENST00000496447 MED17Q9NVC6 651 aa12.14□□□□□ -0.47
PTPRF-215ENST00000496447 STEAP1Q9UHE8 339 aa12.14□□□□□ -0.47
PTPRF-215ENST00000496447 LOXL2Q9Y4K0 774 aa12.14□□□□□ -0.47
PTPRF-215ENST00000496447 SLX4Q8IY92 1834 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 A8MVM7 634 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 SURF4O15260 269 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 HLA-DMAP28067 261 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 RAP2BP61225 183 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 CDC20Q12834 499 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 ESPNLQ6ZVH7 1005 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 APH1AQ96BI3 265 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 ELP4Q96EB1 424 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 GNG12Q9UBI6 72 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 hCG_1809904A0A1W2PP81 198 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 A0A1W2PPE2 198 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 A0A1W2PR64 198 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 A0A1W2PRV1 198 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 PRRG2O14669 202 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 IL1AP01583 271 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 ZNF26P17031 533 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 RAB4BP61018 213 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 TBPL2Q6SJ96 375 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 FRMD1Q8N878 549 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 IP6K3Q96PC2 410 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 LILRB5O75023 590 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 SLC34A2O95436 690 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 LUMP51884 338 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 DYRK1AQ13627 763 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 CD163Q86VB7 1156 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 OR13C9Q8NGT0 318 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 CHTF18Q8WVB6 975 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 NMNAT3Q96T66 252 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 SLC38A1Q9H2H9 487 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 EMC7Q9NPA0 242 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 EHFQ9NZC4 300 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 MYH4Q9Y623 1939 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 NKX6-3A6NJ46 265 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 RPS18P62269 152 aaKnown RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 CXADRP78310 365 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 GPR155Q7Z3F1 870 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 ANKRD19PQ9H560 264 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 SLC5A10A0PJK1 596 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 TMEM212A6NML5 194 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 ARPC1BO15143 372 aaKnown RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 TSPAN15O95858 294 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 OPCMLQ14982 345 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 PEA15Q15121 130 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 LSMEM2Q8N112 164 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 ELF4Q99607 663 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-215ENST00000496447 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
PTPRF-215ENST00000496447 LRIT2A6NDA9 550 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 HSPB6O14558 160 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 TPT1P13693 172 aaKnown RBP12.12□□□□□ -0.47
PTPRF-215ENST00000496447 PPP2CBP62714 309 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 PPP2CAP67775 309 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 ZNF91Q05481 1191 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 LCN10Q6JVE6 187 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 H1FXQ92522 213 aaKnown RBP12.12□□□□□ -0.47
PTPRF-215ENST00000496447 WBP2Q969T9 261 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 WDR76Q9H967 626 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 A0A1W2PPC4 97 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 PRAMEF27A3QJZ7 478 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 TNFSF12O43508 249 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 GPRIN2O60269 458 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 TNFSF15O95150 251 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 HEXAP06865 529 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 GABREP78334 506 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 MLLT11Q13015 90 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-215ENST00000496447 PRAMEF9Q5VWM5 478 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 DHRS4L2Q6PKH6 230 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 FBXW12Q6X9E4 464 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 ZNF836Q6ZNA1 936 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 LINC00346Q8IVM7 164 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 GGHQ92820 318 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 LRFN1Q9P244 771 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 TCRBV5S1A1TA0A578 114 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 RNF212BA8MTL3 300 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 SYT5O00445 386 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 PRAMEF4O60810 478 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 PTGER4P35408 488 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 COX20Q5RI15 118 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 C1orf140Q5VVS0 124 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 FAM71E1Q6IPT2 247 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 Q6ZSR9 355 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 OR5M1Q8NGP8 315 aa12.12□□□□□ -0.47
PTPRF-215ENST00000496447 POC1BQ8TC44 478 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms