RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	TMEM179B	Q7Z7N9	219 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	LUZP2	Q86TE4	346 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	GPAT4	Q86UL3	456 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	MOSPD2	Q8NHP6	518 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	TMEM45B	Q96B21	275 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	TXNDC15	Q96J42	360 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	TNFRSF13C	Q96RJ3	184 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	NTN4	Q9HB63	628 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	EMC3	Q9P0I2	261 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	PRSS50	Q9UI38	385 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	PROCR	Q9UNN8	238 aa		10.52	□□□□□ -0.73
APTX-233	ENST00000496030	NOSIP	Q9Y314	301 aa	Known RBP	10.52	□□□□□ -0.73
APTX-233	ENST00000496030	FN1	P02751	2386 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	COL6A5	A8TX70	2615 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	EEF1E1-BLOC1S5	C9J1V9	151 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	TNFRSF11B	O00300	401 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	EEF1E1	O43324	174 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	ADORA3	P0DMS8	318 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	NQO1	P15559	274 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	HOXB6	P17509	224 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	GTF2E2	P29084	291 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	AQP2	P41181	271 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	GPR4	P46093	362 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	PCYT1A	P49585	367 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	IST1	P53990	364 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	FXYD6P3	P58550	94 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	RPL18	Q07020	188 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	KPNB1	Q14974	876 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	ZSCAN26	Q16670	478 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	GABRG1	Q8N1C3	465 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	LRRC75A	Q8NAA5	344 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	RNASE6	Q93091	150 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	FAM46A	Q96IP4	442 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	REPIN1	Q9BWE0	567 aa	Known RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	DENND2D	Q9H6A0	471 aa	Predicted RBP	10.51	□□□□□ -0.73
APTX-233	ENST00000496030	DLL4	Q9NR61	685 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	ARMC1	Q9NVT9	282 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	GALNT8	Q9NY28	637 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	HIF3A	Q9Y2N7	669 aa		10.51	□□□□□ -0.73
APTX-233	ENST00000496030	STAB1	Q9NY15	2570 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	EFCAB9	A8MZ26	197 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	BLOC1S5-TXNDC5	H3BN57	136 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	TIPRL	O75663	272 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	CIB2	O75838	187 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	CST1	P01037	141 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	HIST1H2AB	P04908	130 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	ZNF43	P17038	809 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	DNAJA1	P31689	397 aa	Known RBP	10.5	□□□□□ -0.73
APTX-233	ENST00000496030	GSS	P48637	474 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	SELENOP	P49908	381 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	FOXG1	P55316	489 aa	Predicted RBP	10.5	□□□□□ -0.73
APTX-233	ENST00000496030	CLDN17	P56750	224 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	LGALS3BP	Q08380	585 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	FAM27E3	Q08E93	113 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	C1orf94	Q6P1W5	598 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	PGBD2	Q6P3X8	592 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	STAC2	Q6ZMT1	411 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	C22orf34	Q6ZV56	151 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	HIST3H2A	Q7L7L0	130 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	AAED1	Q7RTV5	226 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	NANOGNB	Q7Z5D8	188 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	TMEM123	Q8N131	208 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	OR13C2	Q8NGS9	318 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	OR51A7	Q8NH64	312 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	HIST1H2AC	Q93077	130 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	RSRC1	Q96IZ7	334 aa	Known RBP	10.5	□□□□□ -0.73
APTX-233	ENST00000496030	RBM24	Q9BX46	236 aa	Known RBP	10.5	□□□□□ -0.73
APTX-233	ENST00000496030	CXXC4	Q9H2H0	198 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	SLC7A10	Q9NS82	523 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	PARPBP	Q9NWS1	579 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	MED29	Q9NX70	200 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	C6orf203	Q9P0P8	240 aa	Predicted RBP	10.5	□□□□□ -0.73
APTX-233	ENST00000496030	DNAJB9	Q9UBS3	223 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	SIGLEC7	Q9Y286	467 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	TMEM5	Q9Y2B1	443 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	NOX1	Q9Y5S8	564 aa		10.5	□□□□□ -0.73
APTX-233	ENST00000496030	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.5	□□□□□ -0.73
APTX-233	ENST00000496030	FBN1	P35555	2871 aa	Known RBP	10.49	□□□□□ -0.73
APTX-233	ENST00000496030	TRAV27	A0A087WT01	109 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	C11orf98	E9PRG8	122 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030		H3BNX3	289 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	PDLIM1	O00151	329 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	CLOCK	O15516	846 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	MRPL33	O75394	65 aa	Known RBP	10.49	□□□□□ -0.73
APTX-233	ENST00000496030	GAST	P01350	101 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	IGHV3-9	P01782	118 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	F13B	P05160	661 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	IFNGR1	P15260	489 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	AHCY	P23526	432 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	CCKAR	P32238	428 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	CD79B	P40259	229 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	SLC9A3	P48764	834 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	POU3F1	Q03052	451 aa	Predicted RBP	10.49	□□□□□ -0.73
APTX-233	ENST00000496030	C1D	Q13901	141 aa	Known RBP	10.49	□□□□□ -0.73
APTX-233	ENST00000496030	MICA	Q29983	383 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	ZBED5	Q49AG3	693 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	TSPO2	Q5TGU0	170 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	FBXW9	Q5XUX1	488 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030	CASP12	Q6UXS9	341 aa		10.49	□□□□□ -0.73
APTX-233	ENST00000496030		Q6ZT83	130 aa		10.49	□□□□□ -0.73

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