RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LYVE1Q9Y5Y7 322 aa17.14■□□□□ 0.33
HDAC4-212ENST00000495497 FREM1Q5H8C1 2179 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 SH3D21A4FU49 640 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 HTR3EA5X5Y0 456 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 PSMB1P20618 241 aaKnown RBP17.13■□□□□ 0.33
HDAC4-212ENST00000495497 DNAJA1P31689 397 aaKnown RBP17.13■□□□□ 0.33
HDAC4-212ENST00000495497 PCYT1AP49585 367 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 BIDP55957 195 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 CAMK2DQ13557 499 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 P2RY6Q15077 328 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 PHYHD1Q5SRE7 291 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 C1orf146Q5VVC0 180 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 OR2T5Q6IEZ7 315 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 TMPRSS11FQ6ZWK6 438 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 BHLHA15Q7RTS1 189 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-212ENST00000495497 ZER1Q7Z7L7 766 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 OAFQ86UD1 273 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 IGFN1Q86VF2 1251 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 TMEM123Q8N131 208 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF433Q8N7K0 673 aaPredicted RBP17.13■□□□□ 0.33
HDAC4-212ENST00000495497 OR4C15Q8NGM1 316 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 OR2T29Q8NH02 315 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 S100PBPQ96BU1 408 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 ACTR6Q9GZN1 396 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 ASH1LQ9NR48 2969 aaKnown RBP17.13■□□□□ 0.33
HDAC4-212ENST00000495497 ASB6Q9NWX5 421 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 MALT1Q9UDY8 824 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 RCE1Q9Y256 329 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 TMEM5Q9Y2B1 443 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 HIF3AQ9Y2N7 669 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 GPR52Q9Y2T5 361 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 U3KQV3 271 aa17.13■□□□□ 0.33
HDAC4-212ENST00000495497 PDLIM1O00151 329 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 OR10H3O60404 316 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 SLC43A1O75387 559 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 KRT33AO76009 404 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 KRT36O76013 467 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 CNOT4O95628 575 aaKnown RBP17.12■□□□□ 0.33
HDAC4-212ENST00000495497 ITGA5P08648 1049 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 PRF1P14222 555 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 COX5AP20674 150 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 IL32P24001 234 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 PEX19P40855 299 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 HMGA2P52926 109 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 CCNIQ14094 377 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 POMGNT2Q8NAT1 580 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 KISS1RQ969F8 398 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-212ENST00000495497 RSRC1Q96IZ7 334 aaKnown RBP17.12■□□□□ 0.33
HDAC4-212ENST00000495497 ALKBH3Q96Q83 286 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-212ENST00000495497 MED18Q9BUE0 208 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 INIPQ9NRY2 104 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 NDRG3Q9UGV2 375 aa17.12■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF726A6NNF4 738 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 CLOCKO15516 846 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 AKAP8O43823 692 aaKnown RBP17.11■□□□□ 0.33
HDAC4-212ENST00000495497 FKBP6O75344 327 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 RAD51DO75771 328 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 CIB2O75838 187 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 CST1P01037 141 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 THBDP07204 575 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 EPXP11678 715 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF26P17031 533 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-212ENST00000495497 CDH2P19022 906 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-212ENST00000495497 SLC9A3P48764 834 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 RPS4XP62701 263 aaKnown RBP17.11■□□□□ 0.33
HDAC4-212ENST00000495497 ZBED5Q49AG3 693 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 ALG10Q5BKT4 473 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 ALKBH2Q6NS38 261 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 LRRC75AQ8NAA5 344 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 OR9Q2Q8NGE9 314 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 FAM222BQ8WU58 562 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 HDHD5Q9BXW7 423 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 REEP1Q9H902 201 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 MCCC2Q9HCC0 563 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 CCM2LQ9NUG4 571 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-212ENST00000495497 KCNN3Q9UGI6 736 aa17.11■□□□□ 0.33
HDAC4-212ENST00000495497 A0A1W2PRG6 482 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 CIB4A0PJX0 185 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 UNC119BA6NIH7 251 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 M0R3G1 203 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 KLF4O43474 513 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 PTP4A3O75365 173 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 BCL10O95999 233 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 IST1P53990 364 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 CTXN1P60606 82 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 RUNX1T1Q06455 604 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 STK11Q15831 433 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 ACKR1Q16570 336 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 PGBD2Q6P3X8 592 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 C20orf196Q8IYI0 205 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 GPR137CQ8N3F9 429 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 PAPD5Q8NDF8 572 aaKnown RBP17.1■□□□□ 0.33
HDAC4-212ENST00000495497 STEAP2Q8NFT2 490 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 ZNF837Q96EG3 531 aaPredicted RBP17.1■□□□□ 0.33
HDAC4-212ENST00000495497 DACH2Q96NX9 599 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 LINC00470Q9BZP3 86 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 KRCC1Q9NPI7 259 aaPredicted RBP17.1■□□□□ 0.33
HDAC4-212ENST00000495497 TAS2R16Q9NYV7 291 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 IL20RAQ9UHF4 553 aa17.1■□□□□ 0.33
HDAC4-212ENST00000495497 SAMHD1Q9Y3Z3 626 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms