RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 HSP90AA4PQ58FG1 418 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 OR52E8Q6IFG1 317 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 PGAP1Q75T13 922 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 NIPA1Q7RTP0 329 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 SLC16A14Q7RTX9 510 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 CSGALNACT2Q8N6G5 542 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 C9orf106Q8NAJ2 232 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 OR52I1Q8NGK6 324 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 OR9G4Q8NGQ1 327 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 RHEBL1Q8TAI7 183 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 PIBF1Q8WXW3 757 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 KIFAP3Q92845 792 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 MS4A14Q96JA4 679 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 ELOVL4Q9GZR5 314 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 ZBP1Q9H171 429 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 C8orf33Q9H7E9 229 aaPredicted RBP3.54□□□□□ -1.84
GTF3A-208ENST00000493903 TMEM165Q9HC07 324 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 CCNB1IP1Q9NPC3 277 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 THUMPD1Q9NXG2 353 aaKnown RBP3.54□□□□□ -1.84
GTF3A-208ENST00000493903 PRODH2Q9UF12 536 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 KCNIP3Q9Y2W7 256 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 RHBDD3Q9Y3P4 386 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 ADGRB2O60241 1585 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 NRXN1Q9ULB1 1477 aa3.54□□□□□ -1.84
GTF3A-208ENST00000493903 TRPM3Q9HCF6 1732 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 MROH7-TTC4A0A0A0MT08 1334 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 NSG1A0A0A6YYJ2 146 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 TRBV9A0A0B4J1U6 114 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 A0A1B0GTH9 108 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 A0A1W2PPV4 95 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 RPL37AP8A6NKH3 93 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 LRRIQ3A6PVS8 624 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 ZNF705EA8MWA4 302 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 GFYI3L273 518 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 WWP2O00308 870 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 DYNC1I1O14576 645 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 AIM2O14862 343 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 RAB29O14966 203 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 SOX15O60248 233 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 HUS1O60921 280 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 SLC2A10O95528 541 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 FGFR1OPO95684 399 aaKnown RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 FGF1P05230 155 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 C2P06681 752 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 MELTFP08582 738 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 STAG3L2P0CL84 134 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 CD9P21926 228 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 IGHV1-2P23083 117 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 TUBG1P23258 451 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 HOXD10P28358 340 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 ADORA2BP29275 332 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 OXTRP30559 389 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 EPHX2P34913 555 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 LONP1P36776 959 aaKnown RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 NSG1P42857 185 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 CX3CR1P49238 355 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 BCAP31P51572 246 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 FBXW4P57775 412 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 RPL32P62910 135 aaKnown RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 ARL6IP1Q15041 203 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 STK38Q15208 465 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 LIN9Q5TKA1 542 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 STUMQ69YW2 141 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 REEP3Q6NUK4 255 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 UFSP1Q6NVU6 142 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 H3F3CQ6NXT2 135 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 Q6ZSR3 168 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 FRA10AC1Q70Z53 315 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 TIPARPQ7Z3E1 657 aaKnown RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 MCOLN2Q8IZK6 566 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 SLC22A18ASQ8N1D0 253 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 CSNK1G2-AS1Q8NCQ2 148 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 OR9A1PQ8NGU1 263 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 OR56B4Q8NH76 319 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 PAQR8Q8TEZ7 354 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 PYROXD1Q8WU10 500 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 RAB1CQ92928 201 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 PSMG2Q969U7 264 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 KIAA1143Q96AT1 154 aaPredicted RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 TBX15Q96SF7 602 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 GAL3ST1Q99999 423 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 FAIM2Q9BWQ8 316 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 SRXN1Q9BYN0 137 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 TUBG2Q9NRH3 451 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 PTTG3PQ9NZH4 202 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 MTCH1Q9NZJ7 389 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 PLLPQ9Y342 182 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 BZW2Q9Y6E2 419 aaKnown RBP3.53□□□□□ -1.84
GTF3A-208ENST00000493903 UTRNP46939 3433 aa3.53□□□□□ -1.84
GTF3A-208ENST00000493903 IFT172Q9UG01 1749 aa3.53□□□□□ -1.85
GTF3A-208ENST00000493903 ALS2Q96Q42 1657 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 CAMTA1Q9Y6Y1 1673 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 SBNO1A3KN83 1393 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 LRPPRCP42704 1394 aaKnown RBP3.52□□□□□ -1.85
GTF3A-208ENST00000493903 ANKRD30BQ9BXX2 1392 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 SH3TC1Q8TE82 1336 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 KIF1BO60333 1816 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 A0A1B0GUH1 482 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 LOC110117498-PIK3R3F6TDL0 507 aa3.52□□□□□ -1.85
GTF3A-208ENST00000493903 POLR1CO15160 346 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms