RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 TMEM201Q5SNT2 666 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 PODNL1Q6PEZ8 512 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 H1FNTQ75WM6 255 aaPredicted RBP13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 CCDC103Q8IW40 242 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 NRMQ8IXM6 262 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 ZNF610Q8N9Z0 462 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 OR9K2Q8NGE7 335 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 OR5J2Q8NH18 312 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 BPIFA2Q96DR5 249 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 SGTBQ96EQ0 304 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 RSRC1Q96IZ7 334 aaKnown RBP13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 CHID1Q9BWS9 393 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 YY1AP1Q9H869 796 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 B3GAT1Q9P2W7 334 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 SEC14L4Q9UDX3 406 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 TMEM5Q9Y2B1 443 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 LYVE1Q9Y5Y7 322 aa13.28□□□□□ -0.28
CDC42SE1-205ENST00000491825 SH3PXD2BA1X283 911 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 LRRN3E7EW58 273 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 C16orf97H3BN30 126 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 PIP5K1CO60331 668 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 FKBP6O75344 327 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 ACTR3P61158 418 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 LSM11P83369 360 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 PUDPQ08623 228 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 Q5PR19 223 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 TMEM225Q6GV28 225 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 OR2T5Q6IEZ7 315 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 TMPRSS11FQ6ZWK6 438 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 TUSC5Q8IXB3 177 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 OR4K5Q8NGD3 323 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 OR4C15Q8NGM1 316 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 OR2T29Q8NH02 315 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 TMEM45BQ96B21 275 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 SLCO4A1Q96BD0 722 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 PIK3IP1Q96FE7 263 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 KRCC1Q9NPI7 259 aaPredicted RBP13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 PROCRQ9UNN8 238 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 FLVCR1Q9Y5Y0 555 aa13.27□□□□□ -0.29
CDC42SE1-205ENST00000491825 PLPP3O14495 311 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 THBDP07204 575 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 IFI30P13284 250 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 NQO1P15559 274 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 RPS4XP62701 263 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 ZP4Q12836 540 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 SEC23BQ15437 767 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 ACKR1Q16570 336 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 ANKDD1AQ495B1 522 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 RRM2BQ7LG56 351 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 GALNT5Q7Z7M9 940 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 LINC00471Q8N535 108 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 OR52J3Q8NH60 311 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 IGFBPL1Q8WX77 278 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 PIGTQ969N2 578 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 COX4I2Q96KJ9 171 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 OXGR1Q96P68 337 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 REEP1Q9H902 201 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 ARMC1Q9NVT9 282 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 HIF3AQ9Y2N7 669 aa13.26□□□□□ -0.29
CDC42SE1-205ENST00000491825 MS4A18H0YCH9 400 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 TNFRSF11BO00300 401 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 KLF4O43474 513 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 CNOT4O95628 575 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 CST1P01037 141 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 FUT1P19526 365 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 MAKP20794 623 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 CBLP22681 906 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 OMPP47874 163 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 OR3A2P47893 321 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 SLC9A3P48764 834 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 PMS2P3Q13401 168 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 EXOC3L2Q2M3D2 409 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 MS4A18Q3C1V0 323 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 TBPL2Q6SJ96 375 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 TFAP2EQ6VUC0 442 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 CREB3L2Q70SY1 520 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 Q71RC1 249 aaPredicted RBP13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 PXKQ7Z7A4 578 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 GPAT4Q86UL3 456 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 EPHX4Q8IUS5 362 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 CDK20Q8IZL9 346 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 UBTD1Q9HAC8 227 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 TMCC3Q9ULS5 477 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 RCE1Q9Y256 329 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 NOSIPQ9Y314 301 aaKnown RBP13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 NOX1Q9Y5S8 564 aa13.25□□□□□ -0.29
CDC42SE1-205ENST00000491825 FN1P02751 2386 aaKnown RBP13.24□□□□□ -0.29
CDC42SE1-205ENST00000491825 ARRDC5A6NEK1 342 aa13.24□□□□□ -0.29
CDC42SE1-205ENST00000491825 NPIPB13A6NJU9 1138 aa13.24□□□□□ -0.29
CDC42SE1-205ENST00000491825 EFCAB9A8MZ26 197 aa13.24□□□□□ -0.29
CDC42SE1-205ENST00000491825 NPIPB4C9JG80 1138 aa13.24□□□□□ -0.29
CDC42SE1-205ENST00000491825 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
CDC42SE1-205ENST00000491825 TRAF3IP2O43734 574 aaPredicted RBP13.24□□□□□ -0.29
CDC42SE1-205ENST00000491825 SMPD2O60906 423 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms