RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 MAKP20794 623 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SMIM11AP58511 58 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SPIBQ01892 262 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 RPL18Q07020 188 aaKnown RBP14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 GABRA6Q16445 453 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 BEX5Q5H9J7 111 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CARD17Q5XLA6 110 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR7E24Q6IFN5 339 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ALKBH2Q6NS38 261 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PODNL1Q6PEZ8 512 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TBPL2Q6SJ96 375 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SLC35D2Q76EJ3 337 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 LINGO2Q7L985 606 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 RRM2BQ7LG56 351 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 P2RY8Q86VZ1 359 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CDC20BQ86Y33 519 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ZDHHC21Q8IVQ6 265 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CDK20Q8IZL9 346 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 GPR137CQ8N3F9 429 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SLC7A13Q8TCU3 470 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 POP5Q969H6 163 aaKnown RBP14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PIK3IP1Q96FE7 263 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TXNDC15Q96J42 360 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 LRGUKQ96M69 825 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SEPHS2Q99611 448 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 FBN2P35556 2912 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ZNF726A6NNF4 738 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 EFCAB9A8MZ26 197 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 KLF4O43474 513 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 DNAJC8O75937 253 aaPredicted RBP14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TSPAN19P0C672 248 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SAGP10523 405 aaPredicted RBP14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 AQP2P41181 271 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 BIDP55957 195 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ROR2Q01974 943 aaKnown RBP14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TRAP1Q12931 704 aaKnown RBP14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CAMK2DQ13557 499 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PPA1Q15181 289 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 HMBOX1Q6NT76 420 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SSX8Q7RTT4 187 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MEX3DQ86XN8 651 aaKnown RBP14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 C17orf78Q8N4C9 275 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MUCL1Q96DR8 90 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ADAD1Q96M93 576 aaKnown RBP14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MUS81Q96NY9 551 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ZNF347Q96SE7 839 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TRIM15Q9C019 465 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MAGIXQ9H6Y5 334 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 NGBQ9NPG2 151 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 INIPQ9NRY2 104 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TMEM5Q9Y2B1 443 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 HIF3AQ9Y2N7 669 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CACNA1DQ01668 2161 aa14.31□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TRBV4-1A0A0J9YWV2 114 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 A0A1W2PRG6 482 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 RPL36A-HNRNPH2H7BZ11 118 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ACOT8O14734 319 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ATP5HO75947 161 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 GADD45GO95257 159 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 F13BP05160 661 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CDH2P19022 906 aaPredicted RBP14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 HOXC12P31275 282 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 GPR4P46093 362 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SLC9A3P48764 834 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 RASSF2P50749 326 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 NR1H2P55055 460 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MELKQ14680 651 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PGM2L1Q6PCE3 622 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PIWIL3Q7Z3Z3 882 aaKnown RBP14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 WDFY1Q8IWB7 410 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 C20orf196Q8IYI0 205 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR52J3Q8NH60 311 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR6X1Q8NH79 312 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MOSPD2Q8NHP6 518 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PLPPR2Q96GM1 343 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 LRR1Q96L50 414 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 GPR35Q9HC97 309 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 KRCC1Q9NPI7 259 aaPredicted RBP14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 B3GAT2Q9NPZ5 323 aa14.3□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MCIDASD6RGH6 385 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 M0R3G1 203 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CLOCKO15516 846 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 BCL10O95999 233 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 LOXP28300 417 aaPredicted RBP14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 RRM2P31350 389 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MAGEA2P43356 314 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 CSNK1A1P48729 337 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SH3BGRP55822 239 aaPredicted RBP14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 RPS4XP62701 263 aaKnown RBP14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SEC23BQ15437 767 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 FAM98BQ52LJ0 330 aaKnown RBP14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ALG10Q5BKT4 473 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PHYHD1Q5SRE7 291 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SEZ6L2Q6UXD5 910 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TMPRSS11FQ6ZWK6 438 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OAFQ86UD1 273 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR4K5Q8NGD3 323 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR1K1Q8NGR3 316 aa14.29□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR13C2Q8NGS9 318 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms