RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ZNF224Q9NZL3 707 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 NKX1-2Q9UD57 310 aaPredicted RBP5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 GUCA1BQ9UMX6 200 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 NOX1Q9Y5S8 564 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 KCNE3Q9Y6H6 103 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 U3KQK5 164 aa5.93□□□□□ -1.46
PDLIM1-203ENST00000490391 IGHV2-70DA0A0C4DH43 119 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF816-ZNF321PA0A0X1KG74 233 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 TCRBV9S1A1TA0A576 114 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM72A0PK05 275 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 A6NHS1 94 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 NPIPB8E9PQR5 432 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 TNFRSF13BO14836 293 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 PDPK1O15530 556 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 CYP7B1O75881 506 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 AKR7A3O95154 331 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 KLHL2O95198 593 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 OTCP00480 354 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 HMGN2P05204 90 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 C2P06681 752 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 UBTFL6P0CB48 400 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 SSTR1P30872 391 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 SPRP35270 261 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 FRKP42685 505 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 CDH13P55290 713 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 ARL4CP56559 192 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 KLF3P57682 345 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 KRTAP10-11P60412 298 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 PDIA2Q13087 525 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 LASP1Q14847 261 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 PPP1R7Q15435 360 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF141Q15928 474 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 TSTQ16762 297 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 FAM83EQ2M2I3 478 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 TRMT5Q32P41 509 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM155Q4W5P6 130 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF385BQ569K4 471 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 SPRNQ5BIV9 151 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 DEFB121Q5J5C9 76 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 FAM209AQ5JX71 171 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 GKAP1Q5VSY0 366 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 PRAMEF8Q5VWM4 474 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 PRAMEF7Q5VXH5 474 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 CLEC6AQ6EIG7 209 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 ANKRD26P1Q6NSI1 321 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 Q6ZTK2 550 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 SZRD1Q7Z422 152 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF584Q8IVC4 421 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 CCDC36Q8IYA8 594 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 C11orf44Q8N8P7 122 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 GRK7Q8WTQ7 553 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 SNX33Q8WV41 574 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 FAM120BQ96EK7 910 aaKnown RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF764Q96H86 408 aaPredicted RBP5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 FANCD2OSQ96PS1 177 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 GPR35Q9HC97 309 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 DECR2Q9NUI1 292 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 TXNDC16Q9P2K2 825 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 OR5V1Q9UGF6 321 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 EGFL7Q9UHF1 273 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 IL20RAQ9UHF4 553 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 PCDHGB4Q9UN71 923 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 NPTNQ9Y639 398 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 HERC1Q15751 4861 aa5.92□□□□□ -1.46
PDLIM1-203ENST00000490391 LIPT2A6NK58 231 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 TM9SF1O15321 606 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF208O43345 1280 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF500O60304 480 aaPredicted RBP5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 SLC43A1O75387 559 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 CSTAP01040 98 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 KRT6AP02538 564 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 KRT6BP04259 564 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 CCNA2P20248 432 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 PGM1P36871 562 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 IER3P46695 156 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 CAPZA2P47755 286 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 KRT6CP48668 564 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 BPIFB3P59826 476 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 ERVS71-1P61550 626 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 GALK2Q01415 458 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 SLC3A1Q07837 685 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 GSG1Q2KHT4 349 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 CEACAM16Q2WEN9 425 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 NRN1LQ496H8 165 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 TMEM255AQ5JRV8 349 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 GRTP1Q5TC63 336 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 AP1ARQ63HQ0 302 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 RGS7BPQ6MZT1 257 aaPredicted RBP5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 ZNF774Q6NX45 483 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 NIPAL3Q6P499 406 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 EMBQ6PCB8 327 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 LRRN1Q6UXK5 716 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 GPAT4Q86UL3 456 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 LDLRAD3Q86YD5 345 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 PAQR4Q8N4S7 273 aaPredicted RBP5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 SPICQ8N5J4 248 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 MUC7Q8TAX7 377 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 TBC1D15Q8TC07 691 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 CDKL2Q92772 493 aa5.91□□□□□ -1.46
PDLIM1-203ENST00000490391 NEURL3Q96EH8 262 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms