RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 RTN4IP1Q8WWV3 396 aaPredicted RBP1.22□□□□□ -2.21
CBWD1-216ENST00000489272 NEURL3Q96EH8 262 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 PELI1Q96FA3 418 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 ZNF382Q96SR6 550 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 FICDQ9BVA6 458 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 SLC17A5Q9NRA2 495 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 HOXC10Q9NYD6 342 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 CALYQ9NYX4 217 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 SPATA7Q9P0W8 599 aa1.22□□□□□ -2.21
CBWD1-216ENST00000489272 SAMHD1Q9Y3Z3 626 aaKnown RBP1.22□□□□□ -2.21
CBWD1-216ENST00000489272 SPAG9O60271 1321 aaKnown RBP1.21□□□□□ -2.22
CBWD1-216ENST00000489272 ARPC4-TTLL3A0A0A6YYG9 625 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 CIB4A0PJX0 185 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 PFKFB2O60825 505 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 GLAP06280 429 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 C1GALT1C1LP0DN25 315 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 FUT1P19526 365 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 PCMT1P22061 227 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 TGFBR1P36897 503 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 STARD6P59095 220 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 PDIA2Q13087 525 aaKnown RBP1.21□□□□□ -2.22
CBWD1-216ENST00000489272 PDK1Q15118 436 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 FAM78AQ5JUQ0 283 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 RAET1GQ6H3X3 334 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 PGAP1Q75T13 922 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 LRRC52Q8N7C0 313 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 GEMIN6Q8WXD5 167 aaKnown RBP1.21□□□□□ -2.22
CBWD1-216ENST00000489272 FGF14Q92915 247 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 NARS2Q96I59 477 aaKnown RBP1.21□□□□□ -2.22
CBWD1-216ENST00000489272 RIT2Q99578 217 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 REEP4Q9H6H4 257 aa1.21□□□□□ -2.22
CBWD1-216ENST00000489272 CCDC182A6NF36 153 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 TAPBPO15533 448 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 DEDDO75618 318 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 CCNE2O96020 404 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 OR56A5P0C7T3 313 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 TNNI3P19429 210 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 MAP3K8P41279 467 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 ZNF616Q08AN1 781 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 IL15RAQ13261 267 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 GINS1Q14691 196 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 LINC00173Q6ZV60 143 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 NCCRP1Q6ZVX7 275 aaPredicted RBP1.2□□□□□ -2.22
CBWD1-216ENST00000489272 STRADAQ7RTN6 431 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 MREGQ8N565 214 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 FNDC5Q8NAU1 212 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 CNNM3Q8NE01 707 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 TM4SF18Q96CE8 201 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 SH3YL1Q96HL8 342 aaPredicted RBP1.2□□□□□ -2.22
CBWD1-216ENST00000489272 GABARAPL3Q9BY60 117 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 GBA3Q9H227 469 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 THUMPD1Q9NXG2 353 aaKnown RBP1.2□□□□□ -2.22
CBWD1-216ENST00000489272 CHMP2BQ9UQN3 213 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 SIGLEC9Q9Y336 463 aa1.2□□□□□ -2.22
CBWD1-216ENST00000489272 SORL1Q92673 2214 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 IGHV3-74A0A0B4J1X5 117 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 A0A1B0GW55 424 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 LGALS9O00182 355 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 XPO1O14980 1071 aaKnown RBP1.19□□□□□ -2.22
CBWD1-216ENST00000489272 GABARAPO95166 117 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 MBD3O95983 291 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 GAPDHP04406 335 aaKnown RBP1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DUX4L2P0CJ85 424 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DUX4L3P0CJ86 424 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DUX4L5P0CJ88 424 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DUX4L6P0CJ89 424 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DUX4L7P0CJ90 424 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 FOLR1P15328 257 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 SOX6P35712 828 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DDOSTP39656 456 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 GSSP48637 474 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 SLC11A1P49279 550 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 PRRX1P54821 245 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 NUCB2P80303 420 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 MEF2CQ06413 473 aaPredicted RBP1.19□□□□□ -2.22
CBWD1-216ENST00000489272 NCAPD2Q15021 1401 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 SLC15A2Q16348 729 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 CARD16Q5EG05 197 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DUX4L9Q6RFH8 374 aaPredicted RBP1.19□□□□□ -2.22
CBWD1-216ENST00000489272 UNQ9165/PRO28630Q6UXU0 137 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 KDM7AQ6ZMT4 941 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 STPG2Q8N412 459 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 ZADH2Q8N4Q0 377 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 ACOT4Q8N9L9 421 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 OR1P1Q8NH06 330 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 PHOSPHO2Q8TCD6 241 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 TIMM29Q9BSF4 260 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 MRPL13Q9BYD1 178 aaKnown RBP1.19□□□□□ -2.22
CBWD1-216ENST00000489272 LHX5Q9H2C1 402 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DPH5Q9H2P9 285 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 YY1AP1Q9H869 796 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 GIN1Q9NXP7 522 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 IL36GQ9NZH8 169 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 DUX4Q9UBX2 424 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 MMP17Q9ULZ9 603 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 WDR62O43379 1518 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 ANKRD12Q6UB98 2062 aa1.19□□□□□ -2.22
CBWD1-216ENST00000489272 F5H6K3 240 aa1.18□□□□□ -2.22
CBWD1-216ENST00000489272 J3QKU1 62 aa1.18□□□□□ -2.22
CBWD1-216ENST00000489272 DNASE2O00115 360 aaPredicted RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms