RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 OR1L4Q8NGR5 311 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 DTX3LQ8TDB6 740 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 SHC3Q92529 594 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 SMARCD2Q92925 531 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 PLEKHA8Q96JA3 519 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 SORT1Q99523 831 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 CLMPQ9H6B4 373 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 RNF167Q9H6Y7 350 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 NT5MQ9NPB1 228 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 PCYOX1Q9UHG3 505 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 SHPKQ9UHJ6 478 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 ASTN1O14525 1302 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 PPIAL4EA0A075B759 164 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 A0A0U1RQS6 177 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 DLGAP1O14490 977 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 PALMO75781 387 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 TNFSF13O75888 250 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 UBTFL1P0CB47 393 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 GKN3PP0CG01 181 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 PPIAL4FP0DN26 164 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 ATP5C1P36542 298 aaKnown RBP2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 LONP1P36776 959 aaKnown RBP2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 CTRLP40313 264 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 SUB1P53999 127 aaKnown RBP eCLIP2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 ACVR1Q04771 509 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 KIAA0087Q14695 138 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 CEP55Q53EZ4 464 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 PIGGQ5H8A4 983 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 C6orf226Q5I0X4 101 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 FRMPD2BQ6IN97 320 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 DHDDSQ86SQ9 333 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 TRIM69Q86WT6 500 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 RALGPS2Q86X27 583 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 TPRX1Q8N7U7 411 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 Q8N9L7 120 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 MDS2Q8NDY4 140 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 VN1R2Q8NFZ6 395 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR2G3Q8NGZ4 309 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR2G2Q8NGZ5 317 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 TPD52L3Q96J77 140 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR8B4Q96RC9 309 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 CNN2Q99439 309 aaKnown RBP2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 GPR61Q9BZJ8 451 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 ANKRD19PQ9H560 264 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 ADAP2Q9NPF8 381 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 ETNK2Q9NVF9 386 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF226Q9NYT6 803 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 CALYQ9NYX4 217 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 SLC25A37Q9NYZ2 338 aa2.5□□□□□ -2.01
HMGB1P36-201ENST00000487709 IGLV3-16A0A075B6K0 115 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 FAM166BA8MTA8 275 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 PES1O00541 588 aaKnown RBP2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 UPK3AO75631 287 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 NDUFB10O96000 172 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 TROVE2P10155 538 aaKnown RBP eCLIP2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 SLC2A3P11169 496 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 UBE2AP49459 152 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 UBE2HP62256 183 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 TCP10Q12799 353 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 GGTLC2Q14390 218 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 GPNMBQ14956 572 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 TGFBIQ15582 683 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 AGBL2Q5U5Z8 902 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 TRIM40Q6P9F5 258 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 CNIH2Q6PI25 160 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 ACP7Q6ZNF0 438 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 LINC01551Q86U37 167 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 TMEM135Q86UB9 458 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 EGFL6Q8IUX8 553 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 MFSD6LQ8IWD5 586 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 SPATA4Q8NEY3 305 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR4F15Q8NGB8 312 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 ACER1Q8TDN7 264 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 SDR42E1Q8WUS8 393 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF606Q8WXB4 792 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 PIBF1Q8WXW3 757 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 FOPNLQ96NB1 174 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 OXGR1Q96P68 337 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 MTMR9Q96QG7 549 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 PANX2Q96RD6 677 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 NPY6RQ99463 290 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 SH3GL1Q99961 368 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 OSBPL10Q9BXB5 764 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 ROPN1BQ9BZX4 212 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 DEFB127Q9H1M4 99 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 NXF3Q9H4D5 531 aaKnown RBP2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 CCL28Q9NRJ3 127 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 HYPKQ9NX55 129 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 STOX2Q9P2F5 926 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 DEC1Q9P2X7 70 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF223Q9UK11 482 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 RAB26Q9ULW5 256 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 HEBP2Q9Y5Z4 205 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 ATAD2BQ9ULI0 1458 aa2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 COL4A4P53420 1690 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P36-201ENST00000487709 ARHGEF35A5YM69 484 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 PEX7O00628 323 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 CIB2O75838 187 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR7A10O76100 309 aa2.48□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF853P0CG23 659 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms