RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PHF21AQ96BD5 680 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 ZNF304Q9HCX3 659 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 MMP25Q9NPA2 562 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 MRPS7Q9Y2R9 242 aaKnown RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 KNL1Q8NG31 2342 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 A0A1B0GVI7 797 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 ASAH2BP0C7U1 165 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 CDKN2AP42771 156 aaKnown RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 STARD6P59095 220 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 SNRPD2P62316 118 aaKnown RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 SNTB2Q13425 540 aaKnown RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 ALG10Q5BKT4 473 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 APOOLQ6UXV4 268 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 KMT5CQ86Y97 462 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 OR1L3Q8NH93 324 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 ZNF563Q8TA94 476 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 RGP1Q92546 391 aaPredicted RBP23.73■■□□□ 1.39
HLA-C-208ENST00000487245 ADAM19Q9H013 955 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 DIABLOQ9NR28 239 aa23.73■■□□□ 1.39
HLA-C-208ENST00000487245 NAP1L6A6NFF2 107 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 TO15178 435 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 ECDO95905 644 aaPredicted RBP23.72■■□□□ 1.39
HLA-C-208ENST00000487245 ANKRD34CP0C6C1 535 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 SULT1A3P0DMM9 295 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 SULT1A4P0DMN0 295 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 SDHAP31040 664 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 GDNFP39905 211 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 NANOS3P60323 173 aaKnown RBP23.72■■□□□ 1.39
HLA-C-208ENST00000487245 CTXN1P60606 82 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 CBLN3Q6UW01 205 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 ESPNLQ6ZVH7 1005 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 Q96M85 177 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 ADOQ96SZ5 270 aa23.72■■□□□ 1.39
HLA-C-208ENST00000487245 A0A1W2PQD3 144 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 EIF4E2O60573 245 aaKnown RBP23.71■■□□□ 1.39
HLA-C-208ENST00000487245 TPPPO94811 219 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 CALCBP10092 127 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 IL12BP29460 328 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 UQCRC1P31930 480 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 MNDAP41218 407 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 CSNK1EP49674 416 aaKnown RBP23.71■■□□□ 1.39
HLA-C-208ENST00000487245 GXYLT1Q4G148 440 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 SLC25A38Q96DW6 304 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 MNTQ99583 582 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 NUDT9Q9BW91 350 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 DHCR7Q9UBM7 475 aaKnown RBP23.71■■□□□ 1.39
HLA-C-208ENST00000487245 EML5Q05BV3 1969 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 UNC80Q8N2C7 3258 aa23.71■■□□□ 1.39
HLA-C-208ENST00000487245 MEIKINA0A087WXM9 373 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 PRR32B1ATL7 298 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 GABARAPH6UMI1 98 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 PRKNO60260 465 aaPredicted RBP23.7■■□□□ 1.39
HLA-C-208ENST00000487245 ZFPL1O95159 310 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 HIST1H2ABP04908 130 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 MRPS10P82664 201 aaKnown RBP23.7■■□□□ 1.39
HLA-C-208ENST00000487245 IKZF1Q13422 519 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 CLPPQ16740 277 aaPredicted RBP23.7■■□□□ 1.39
HLA-C-208ENST00000487245 ELFN2Q5R3F8 820 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 HIST3H2AQ7L7L0 130 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 LUZP2Q86TE4 346 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 BMPERQ8N8U9 685 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 ZNF431Q8TF32 576 aaPredicted RBP23.7■■□□□ 1.39
HLA-C-208ENST00000487245 HIST1H2ACQ93077 130 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 MAP6Q96JE9 813 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 SLC41A2Q96JW4 573 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 FOXQ1Q9C009 403 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 V9GY05 133 aa23.7■■□□□ 1.39
HLA-C-208ENST00000487245 TMEM265A0A087WTH1 108 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 XIRP2A4UGR9 3374 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 ZNF593O00488 134 aaPredicted RBP23.7■■□□□ 1.38
HLA-C-208ENST00000487245 RAB40ALP0C0E4 278 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 GLB1P16278 677 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 CCR6P51684 374 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 CCR9P51686 369 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 EBPQ15125 230 aaKnown RBP23.7■■□□□ 1.38
HLA-C-208ENST00000487245 RNASE12Q5GAN4 147 aaKnown RBP23.7■■□□□ 1.38
HLA-C-208ENST00000487245 PRSS42Q7Z5A4 293 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 SPEM1Q8N4L4 309 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 RAB40AQ8WXH6 277 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 DNASE2BQ8WZ79 361 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 MOGAT1Q96PD6 335 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 FKRPQ9H9S5 495 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 ZNF222Q9UK12 451 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 PCDH15Q96QU1 1955 aa23.7■■□□□ 1.38
HLA-C-208ENST00000487245 OR6C76A6NM76 312 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 UPK3AO75631 287 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 MT-ND4P03905 459 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 MAPK3P27361 379 aaPredicted RBP23.69■■□□□ 1.38
HLA-C-208ENST00000487245 TACR3P29371 465 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 AP3S2P59780 193 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 EGR4Q05215 589 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 GPR139Q6DWJ6 353 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 PRSS45Q7RTY3 260 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 FAM220AQ7Z4H9 259 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 GAL3ST4Q96RP7 486 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 AUNIPQ9H7T9 357 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 B3GNT2Q9NY97 397 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 COPS7AQ9UBW8 275 aa23.69■■□□□ 1.38
HLA-C-208ENST00000487245 ETV7Q9Y603 341 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms