RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 SIRT4Q9Y6E7 314 aaPredicted RBP7.06□□□□□ -1.28
COL6A4P1-202ENST00000487147 SLC22A23A1A5C7 686 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MEGF11A6BM72 1044 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 TBX19O60806 448 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 B4GALT2O60909 372 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 SNRNP70P08621 437 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 F3P13726 295 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CPMP14384 443 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 HIST1H1CP16403 213 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 POU3F2P20265 443 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ALKBH1Q13686 389 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 DHCR24Q15392 516 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 USF2Q15853 346 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 EOGTQ5NDL2 527 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 SHEQ5VZ18 495 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ACOT7LQ6ZUV0 252 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 OVCH2Q7RTZ1 564 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 OR52E1Q8NGJ3 308 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 FAM46BQ96A09 425 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 RAB7BQ96AH8 199 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MIB2Q96AX9 1013 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 PELI1Q96FA3 418 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 DGAT2Q96PD7 388 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 SDF2Q99470 211 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 PFDN5Q99471 154 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 TSPAN10Q9H1Z9 355 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MAN2C1Q9NTJ4 1040 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 EPHA6Q9UF33 1036 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MGAMO43451 1857 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 LCTP09848 1927 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 PHYHO14832 338 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 VNN2O95498 520 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 TSPAN15O95858 294 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CD3DP04234 171 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ANKRD34CP0C6C1 535 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 NID1P14543 1247 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ZNF20P17024 532 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 NAGAP17050 411 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 G0S2P27469 103 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 HOXC8P31273 242 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 RBMXP38159 391 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 BCL6P41182 706 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 EIF2B1Q14232 305 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 GFOD2Q3B7J2 385 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 PLEKHN1Q494U1 663 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 LIPNQ5VXI9 398 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 NDUFAF7Q7L592 441 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 AHCYL2Q96HN2 611 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MYADMQ96S97 322 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 G6PC3Q9BUM1 346 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 GAREM1Q9H706 876 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CCL26Q9Y258 94 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 POLR2AP24928 1970 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 TEX13DA0A0J9YY54 714 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 RFPL4AA6NLU0 287 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ZNF878C9JN71 531 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 RFPL4AL1F8VTS6 287 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 WRBO00258 174 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 PEX12O00623 359 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 GSTZ1O43708 216 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CDK3Q00526 305 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ETFDHQ16134 617 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 SLC36A2Q495M3 483 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 GXYLT1Q4G148 440 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 LPCAT3Q6P1A2 487 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 Q6ZNB5 142 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 LINC00518Q8N0U6 118 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 AMER3Q8N944 861 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MFSD8Q8NHS3 518 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 FAM3DQ96BQ1 224 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MS4A6EQ96DS6 147 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CMTM3Q96MX0 182 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 SERINC2Q96SA4 455 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 INSM2Q96T92 566 aaPredicted RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 TMEM231Q9H6L2 316 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CA10Q9NS85 328 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 TM7SF3Q9NS93 570 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ZFP57Q9NU63 452 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 SOHLH2Q9NX45 425 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 OPN4Q9UHM6 478 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ZNF337Q9Y3M9 751 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 DICER1Q9UPY3 1922 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 NYNRINQ9P2P1 1898 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MFSD2BA6NFX1 497 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CTDSPLO15194 276 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 RHOP08100 348 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 OR4E1P0C645 316 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 TFPIP10646 304 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CTSEP14091 401 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 ZNF28P17035 718 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 SPI1P17947 270 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CTNNB1P35222 781 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 RAB13P51153 203 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 NR0B1P51843 470 aaKnown RBP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 MLC1Q15049 377 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 RHEBQ15382 184 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 STAC2Q6ZMT1 411 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 DPY19L4Q7Z388 723 aa7.05□□□□□ -1.28
COL6A4P1-202ENST00000487147 CMIPQ8IY22 773 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms