RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 FOXG1P55316 489 aaPredicted RBP8.99□□□□□ -0.97
NEK4-204ENST00000487068 UBE2NP61088 152 aaKnown RBP8.99□□□□□ -0.97
NEK4-204ENST00000487068 ROR2Q01974 943 aaKnown RBP8.99□□□□□ -0.97
NEK4-204ENST00000487068 LTBQ06643 244 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 MELKQ14680 651 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 TRAM2Q15035 370 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 TIMM23BQ5SRD1 257 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 ADAM5Q6NVV9 412 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 LINC00114Q6XXX2 140 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 ZNF730Q6ZMV8 503 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 ZNF704Q6ZNC4 412 aaPredicted RBP8.99□□□□□ -0.97
NEK4-204ENST00000487068 OFCC1Q8IZS5 231 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 LRRC17Q8N6Y2 441 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 ZIC4Q8N9L1 334 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 MCUR1Q96AQ8 359 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 SGTBQ96EQ0 304 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 HS6ST2Q96MM7 605 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 HS3ST6Q96QI5 342 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 PRSS27Q9BQR3 290 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 EMC6Q9BV81 110 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 CCM2LQ9NUG4 571 aaPredicted RBP8.99□□□□□ -0.97
NEK4-204ENST00000487068 B3GAT1Q9P2W7 334 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 POU2F3Q9UKI9 436 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 RNF115Q9Y4L5 304 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 NOX1Q9Y5S8 564 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 SNX13Q9Y5W8 968 aa8.99□□□□□ -0.97
NEK4-204ENST00000487068 ROS1P08922 2347 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 A0A1W2PRG6 482 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 PLPP3O14495 311 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 UPK3AO75631 287 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 OR7A10O76100 309 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 LYPD3O95274 346 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 HPRP00739 348 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 HSD17B1P14061 328 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 CAPZA2P47755 286 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 MMP16P51512 607 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 ART1P52961 327 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 BIDP55957 195 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 SPIBQ01892 262 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 BSPH1Q075Z2 132 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 CAMK2DQ13557 499 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 GABRA6Q16445 453 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 KLHL17Q6TDP4 642 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 CYP2R1Q6VVX0 501 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 SLC35D2Q76EJ3 337 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 SSX8Q7RTT4 187 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 PXKQ7Z7A4 578 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 P2RY8Q86VZ1 359 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 CDK20Q8IZL9 346 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 C17orf78Q8N4C9 275 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 C1orf162Q8NEQ5 155 aaPredicted RBP8.98□□□□□ -0.97
NEK4-204ENST00000487068 CCDC124Q96CT7 223 aaKnown RBP8.98□□□□□ -0.97
NEK4-204ENST00000487068 OR2M2Q96R28 347 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 CCL19Q99731 98 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 ZNF426Q9BUY5 554 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 C1QTNF6Q9BXI9 259 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 ULBP2Q9BZM5 246 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 CRLF2Q9HC73 371 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 KRCC1Q9NPI7 259 aaPredicted RBP8.98□□□□□ -0.97
NEK4-204ENST00000487068 MEPEQ9NQ76 525 aaPredicted RBP8.98□□□□□ -0.97
NEK4-204ENST00000487068 C20orf141Q9NUB4 165 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 A4GNTQ9UNA3 340 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 AMDHD2Q9Y303 409 aa8.98□□□□□ -0.97
NEK4-204ENST00000487068 MAGED1Q9Y5V3 778 aaPredicted RBP8.98□□□□□ -0.97
NEK4-204ENST00000487068 NF1P21359 2839 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 A0A096LPE4 126 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 A0A1W2PPR1 153 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 SLC35F4A4IF30 521 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 MS4A18H0YCH9 400 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 ABCD4O14678 606 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 KLF4O43474 513 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 FZD7O75084 574 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 SEC14L2O76054 403 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 PDE5AO76074 875 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 DIRAS1O95057 198 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 WNT11O96014 354 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 F13BP05160 661 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 IFNGR1P15260 489 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 ITGA2P17301 1181 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 FUT1P19526 365 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 GPR4P46093 362 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 CSNK1A1P48729 337 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 IST1P53990 364 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 SH3BGRP55822 239 aaPredicted RBP8.97□□□□□ -0.97
NEK4-204ENST00000487068 CLRN1P58418 232 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 PRPS1P60891 318 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 RPL18Q07020 188 aaKnown RBP8.97□□□□□ -0.97
NEK4-204ENST00000487068 TOP3AQ13472 1001 aaPredicted RBP8.97□□□□□ -0.97
NEK4-204ENST00000487068 CEACAM16Q2WEN9 425 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 MS4A18Q3C1V0 323 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 HIKESHIQ53FT3 197 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 TMEM108Q6UXF1 575 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 RINLQ6ZS11 566 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 TRPM8Q7Z2W7 1104 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 SLC46A3Q7Z3Q1 461 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 HDDC2Q7Z4H3 204 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 MEX3DQ86XN8 651 aaKnown RBP8.97□□□□□ -0.97
NEK4-204ENST00000487068 NRMQ8IXM6 262 aa8.97□□□□□ -0.97
NEK4-204ENST00000487068 FAM86B1Q8N7N1 296 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms