RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 WNT16Q9UBV4 365 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 KLHDC2Q9Y2U9 406 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 EML5Q05BV3 1969 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 A0A1B0GTQ1 180 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 CDC14CA4D256 554 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 DCTN6O00399 190 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 GSTZ1O43708 216 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 TMEM127O75204 238 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 UPK3AO75631 287 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 C1QBP02746 253 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 OR8G3PP0DMU2 310 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 NR0B1P51843 470 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 MRPL28Q13084 256 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 VWA2Q5GFL6 755 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 SNAP47Q5SQN1 464 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 GPR139Q6DWJ6 353 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 MARCH3Q86UD3 253 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 HSD17B8Q92506 261 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 DAZLQ92904 295 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 ZFP3Q96NJ6 502 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 TRAF4Q9BUZ4 470 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 ANKRD10Q9NXR5 420 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 RABL2AQ9UBK7 228 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 MRM2Q9UI43 246 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 RABL2BQ9UNT1 228 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 MRPS17Q9Y2R5 130 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 MRPS7Q9Y2R9 242 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 MPDZO75970 2070 aa16.32■□□□□ 0.2
PDLIM7-207ENST00000486828 ALG1L2C9J202 215 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 H7C1C5 153 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 AIPO00170 330 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 NUDT21O43809 227 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 DUX1O43812 170 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 EIF4E2O60573 245 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 ITGA10O75578 1167 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 ABHD16AO95870 558 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 RENP00797 406 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 BGLAPP02818 100 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 CXCR1P25024 350 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 CSNK1EP49674 416 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 GZMKP49863 264 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 LCN6P62502 163 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 PLCXD2Q0VAA5 305 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 FAPQ12884 760 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 ALKBH1Q13686 389 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 NSDHLQ15738 373 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 ESPNLQ6ZVH7 1005 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 UBALD2Q8IYN6 164 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 ORAI1Q96D31 301 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 MAP6Q96JE9 813 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 SLC25A18Q9H1K4 315 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 SEMA5BQ9P283 1151 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 NUBP2Q9Y5Y2 271 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 IFITM5A6NNB3 132 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 NDUFB5O43674 189 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 GMFGO60234 142 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 CDC40O60508 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 RPP14O95059 124 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 SLC34A2O95436 690 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 DHFRP00374 187 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 FOLR1P15328 257 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 ITPKBP27987 946 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 MAB21L1Q13394 359 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 TOMM34Q15785 309 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 RNASE12Q5GAN4 147 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 LIPNQ5VXI9 398 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 SIAH3Q8IW03 269 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 CMTM4Q8IZR5 234 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 OR6V1Q8N148 313 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 ZFAND1Q8TCF1 268 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 MNTQ99583 582 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 C7orf50Q9BRJ6 194 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 WWTR1Q9GZV5 400 aa16.31■□□□□ 0.2
PDLIM7-207ENST00000486828 TRAV36DV7A0A075B6V5 113 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 A0A0A6YYJ9 748 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 HES5Q5TA89 166 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 ARHGAP40Q5TG30 622 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 EEF1A1P5Q5VTE0 462 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 FAM199XQ6PEV8 388 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 OR5AK2Q8NH90 309 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 SMIM4Q8WVI0 70 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 SLC41A2Q96JW4 573 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 FOXQ1Q9C009 403 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 TSPAN10Q9H1Z9 355 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 COPS7AQ9UBW8 275 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 V9GY05 133 aa16.3■□□□□ 0.2
PDLIM7-207ENST00000486828 A0A1B0GX78 115 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 C7orf66A4D0T2 115 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 TVP23AA6NH52 213 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 C17orf51A8MQB3 221 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 TCRBP04435 133 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 PRKCAP17252 672 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 PGCP20142 388 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 DPP4P27487 766 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 CSF2RBP32927 897 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 EVI2BP34910 448 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 MAGEB1P43366 347 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 TNK1Q13470 666 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 Q499Y3 187 aa16.29■□□□□ 0.2
PDLIM7-207ENST00000486828 Q5BKY6 102 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms