RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 STRADBQ9C0K7 418 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 RPRD1BQ9NQG5 326 aaKnown RBP10.81□□□□□ -0.68
PKP4-213ENST00000486254 SLC39A1Q9NY26 324 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 PPP4R1LQ9P1A2 415 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 PISDQ9UG56 409 aa10.81□□□□□ -0.68
PKP4-213ENST00000486254 A0A087WZY1 265 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 A0A1W2PNV4 684 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 E9PI62 339 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 RGS5O15539 181 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 TBX1O43435 398 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 SLC19A2O60779 497 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 OR2J2O76002 312 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 F13BP05160 661 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 CCL4P13236 92 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 MYL9P24844 172 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 NAA10P41227 235 aaPredicted RBP10.8□□□□□ -0.68
PKP4-213ENST00000486254 ZNF41P51814 821 aaPredicted RBP10.8□□□□□ -0.68
PKP4-213ENST00000486254 FOXL2P58012 376 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 DCAF12Q5T6F0 453 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 LAX1Q8IWV1 398 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 ABHD4Q8TB40 342 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 KLHL15Q96M94 604 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 SOSTQ9BQB4 213 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 SRRQ9GZT4 340 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 MIXL1Q9H2W2 232 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 TPK1Q9H3S4 243 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 WDR76Q9H967 626 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 ALKBH4Q9NXW9 302 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 ETAA1Q9NY74 926 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 KLRF1Q9NZS2 232 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
PKP4-213ENST00000486254 B3GALT5Q9Y2C3 310 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 PTRH2Q9Y3E5 179 aaKnown RBP10.8□□□□□ -0.68
PKP4-213ENST00000486254 HS3ST3B1Q9Y662 390 aa10.8□□□□□ -0.68
PKP4-213ENST00000486254 A0A1W2PRG6 482 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 LNP1A1A4G5 178 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 SELENOFO60613 162 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 OR6A2O95222 327 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ABHD16AO95870 558 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 UCHL1P09936 223 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 CLEC2LP0C7M8 214 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 CRABP1P29762 137 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 FOLR3P41439 243 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 CASP3P42574 277 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 GDI2P50395 445 aaKnown RBP10.79□□□□□ -0.68
PKP4-213ENST00000486254 DAP3P51398 398 aaKnown RBP10.79□□□□□ -0.68
PKP4-213ENST00000486254 BCAP31P51572 246 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 MXD1Q05195 221 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 PUDPQ08623 228 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 EIF3IQ13347 325 aaKnown RBP10.79□□□□□ -0.68
PKP4-213ENST00000486254 ZNF79Q15937 498 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ACKR1Q16570 336 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 BTBD16Q32M84 506 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 YIF1BQ5BJH7 314 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 AGAP7PQ5VUJ5 663 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 C3orf33Q6P1S2 294 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 FDX2Q6P4F2 183 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 UNQ9370/PRO34162Q6UXP9 181 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 FAM220AQ7Z4H9 259 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ZNF248Q8NDW4 579 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 OR10G3Q8NGC4 313 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ZNRF4Q8WWF5 429 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ASB17Q8WXJ9 295 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 GHSRQ92847 366 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ZBTB8AQ96BR9 441 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 C8orf44Q96CB5 159 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 NXPE2Q96DL1 559 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 NECAB3Q96P71 396 aaPredicted RBP10.79□□□□□ -0.68
PKP4-213ENST00000486254 INTS14Q96SY0 518 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ATF6BQ99941 703 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 MESP1Q9BRJ9 268 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 RNF32Q9H0A6 362 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ARRDC1-AS1Q9H2J1 176 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ZCCHC4Q9H5U6 513 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 METTL7AQ9H8H3 244 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 ABCB10Q9NRK6 738 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 SERINC1Q9NRX5 453 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 COPS3Q9UNS2 423 aa10.79□□□□□ -0.68
PKP4-213ENST00000486254 CHCHD2Q9Y6H1 151 aaPredicted RBP10.79□□□□□ -0.68
PKP4-213ENST00000486254 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.78□□□□□ -0.68
PKP4-213ENST00000486254 SHISA3A0PJX4 238 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 FUOMA2VDF0 154 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 CD8B2A6NJW9 211 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 B4DXG7 233 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 FAM47E-STBD1D6RA91 191 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 ZNF432O94892 652 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 DLGAP3O95886 979 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 HLA-DQB1P01920 261 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 CD8BP10966 210 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 ICAM2P13598 275 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 ALOX5APP20292 161 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 AVPR2P30518 371 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 NUBP1P53384 320 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 CHAF1BQ13112 559 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 TP53I3Q53FA7 332 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 ZMAT1Q5H9K5 638 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 C1QL3Q5VWW1 255 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 CDCP2Q5VXM1 449 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 DNM1P34Q6PK57 102 aa10.78□□□□□ -0.68
PKP4-213ENST00000486254 C16orf47Q6ZP98 133 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms