RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 DLL4Q9NR61 685 aa13.1□□□□□ -0.31
YIF1A-208ENST00000485820 MED29Q9NX70 200 aa13.1□□□□□ -0.31
YIF1A-208ENST00000485820 ABCD2Q9UBJ2 740 aa13.1□□□□□ -0.31
YIF1A-208ENST00000485820 A4GNTQ9UNA3 340 aa13.1□□□□□ -0.31
YIF1A-208ENST00000485820 MGAT4BQ9UQ53 548 aa13.1□□□□□ -0.31
YIF1A-208ENST00000485820 LAMP3Q9UQV4 416 aa13.1□□□□□ -0.31
YIF1A-208ENST00000485820 KPNA4O00629 521 aaPredicted RBP13.09□□□□□ -0.31
YIF1A-208ENST00000485820 ARHGEF9O43307 516 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 CD8AP01732 235 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 MT-ND1P03886 318 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 THRBP10828 461 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 FUT4P22083 530 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 AHCYP23526 432 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 RBM34P42696 430 aaKnown RBP13.09□□□□□ -0.31
YIF1A-208ENST00000485820 PTH2RP49190 550 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 ARF1P84077 181 aaKnown RBP13.09□□□□□ -0.31
YIF1A-208ENST00000485820 POU3F1Q03052 451 aaPredicted RBP13.09□□□□□ -0.31
YIF1A-208ENST00000485820 SPOCK1Q08629 439 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 ANKRD16Q6P6B7 361 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 CBLL1Q75N03 491 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 SLC46A3Q7Z3Q1 461 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 VTCN1Q7Z7D3 282 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
YIF1A-208ENST00000485820 GPR137CQ8N3F9 429 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 PIK3C3Q8NEB9 887 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 TMEM255BQ8WV15 326 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 PERPQ96FX8 193 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 CRLF2Q9HC73 371 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 OBP2BQ9NPH6 170 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 ZNF229Q9UJW7 825 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 MAGED1Q9Y5V3 778 aaPredicted RBP13.09□□□□□ -0.31
YIF1A-208ENST00000485820 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
YIF1A-208ENST00000485820 VPS13CQ709C8 3753 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 A0A096LPE4 126 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 ARPC4-TTLL3A0A0A6YYG9 625 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 A0A1W2PPZ6 126 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 E7EQL1 145 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 C11orf98E9PRG8 122 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 GSTA4O15217 222 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 AKAP8O43823 692 aaKnown RBP13.08□□□□□ -0.32
YIF1A-208ENST00000485820 OR6A2O95222 327 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 WNT11O96014 354 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 IGF2P01344 180 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
YIF1A-208ENST00000485820 UGT2B15P54855 530 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 SH3BGRP55822 239 aaPredicted RBP13.08□□□□□ -0.32
YIF1A-208ENST00000485820 CAMK2DQ13557 499 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 CEACAM16Q2WEN9 425 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 CARD17Q5XLA6 110 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 SLC22A25Q6T423 547 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 PFN4Q8NHR9 129 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 TMEM239Q8WW34 195 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 LZICQ8WZA0 190 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 HS6ST2Q96MM7 605 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 CXorf56Q9H5V9 222 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 C20orf141Q9NUB4 165 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
YIF1A-208ENST00000485820 ZNF726A6NNF4 738 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 M0R3G1 203 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 FFAR1O14842 300 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 IFNGR1P15260 489 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 FOSL1P15407 271 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 NCK1P16333 377 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 FUT1P19526 365 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 PAX7P23759 505 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 RPS4XP62701 263 aaKnown RBP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 ST3GAL3Q11203 375 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 Q5PR19 223 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 KLHL24Q6TFL4 600 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 B3GLCTQ6Y288 498 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 SLC35D2Q76EJ3 337 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 TSEN54Q7Z6J9 526 aaKnown RBP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 KCTD14Q9BQ13 255 aaPredicted RBP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 TRAF4Q9BUZ4 470 aaPredicted RBP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 GRIP2Q9C0E4 1043 aa13.07□□□□□ -0.32
YIF1A-208ENST00000485820 CRNNQ9UBG3 495 aaPredicted RBP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 FLNAP21333 2647 aaKnown RBP13.07□□□□□ -0.32
YIF1A-208ENST00000485820 IGHV1-18A0A0C4DH31 117 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 ZNF99A8MXY4 864 aaPredicted RBP13.06□□□□□ -0.32
YIF1A-208ENST00000485820 J3KTA2 159 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 RNF13O43567 381 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 OR7A10O76100 309 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 ZNF682O95780 498 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 SERPINA1P01009 418 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 TSPAN19P0C672 248 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 CDH11P55287 796 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 BIDP55957 195 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 UBE2NP61088 152 aaKnown RBP13.06□□□□□ -0.32
YIF1A-208ENST00000485820 TUBA1BP68363 451 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 TUBA4AP68366 448 aa13.06□□□□□ -0.32
YIF1A-208ENST00000485820 TUBA1AQ71U36 451 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms