RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 NEU4Q8WWR8 484 aaPredicted RBP16.63■□□□□ 0.25
COL27A1-205ENST00000485397 TLCD1Q96CP7 247 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 ANKRD27Q96NW4 1050 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 NOX3Q9HBY0 568 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 USP22Q9UPT9 525 aa16.63■□□□□ 0.25
COL27A1-205ENST00000485397 SVEP1Q4LDE5 3571 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 A0A087WUJ7 227 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 AKAP8O43823 692 aaKnown RBP16.62■□□□□ 0.25
COL27A1-205ENST00000485397 LILRA1O75019 489 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 HLA-HP01893 362 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 GIFP27352 417 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 STX1BP61266 288 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 SNTB2Q13425 540 aaKnown RBP16.62■□□□□ 0.25
COL27A1-205ENST00000485397 DAG1Q14118 895 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 ADRM1Q16186 407 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 MSMPQ1L6U9 139 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 CR1LQ2VPA4 569 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 PAGE3Q5JUK9 113 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 REEP3Q6NUK4 255 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 ULK3Q6PHR2 472 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 WDFY1Q8IWB7 410 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 ADPRHL1Q8NDY3 354 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 CKAP2Q8WWK9 683 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 SLC41A3Q96GZ6 507 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 TXNDC15Q96J42 360 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 WFDC6Q9BQY6 131 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 TMBIM4Q9HC24 238 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 DYNLRB1Q9NP97 96 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 B3GNT2Q9NY97 397 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 VAPAQ9P0L0 249 aa16.62■□□□□ 0.25
COL27A1-205ENST00000485397 FBXO9Q9UK97 447 aaPredicted RBP16.62■□□□□ 0.25
COL27A1-205ENST00000485397 LRRN3E7EW58 273 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 LYNX1G3V0Z9 82 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 BGLAPP02818 100 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 ADRA2AP08913 450 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 LYNX1P0DP58 116 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 NQO1P15559 274 aaKnown RBP16.61■□□□□ 0.25
COL27A1-205ENST00000485397 HNF1AP20823 631 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 MRPL19P49406 292 aaKnown RBP16.61■□□□□ 0.25
COL27A1-205ENST00000485397 PIGFQ07326 219 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 OR1Q1Q15612 314 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 FAM91A1Q658Y4 838 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 BLOC1S3Q6QNY0 202 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 NHLRC1Q6VVB1 395 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 CCDC36Q8IYA8 594 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 ZNF786Q8N393 782 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 IL17RDQ8NFM7 739 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 UBASH3BQ8TF42 649 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 SLC47A1Q96FL8 570 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 MS4A3Q96HJ5 214 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 SPATA5L1Q9BVQ7 753 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 TPK1Q9H3S4 243 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 IKZF5Q9H5V7 419 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 TMEM27Q9HBJ8 222 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 TCF7L2Q9NQB0 619 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 MED29Q9NX70 200 aa16.61■□□□□ 0.25
COL27A1-205ENST00000485397 A0A0B4J2E0 115 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 A0A1B0GX12 115 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 TPST2O60704 377 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 ERCC1P07992 297 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-205ENST00000485397 TACSTD2P09758 323 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 CD79AP11912 226 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 AQP1P29972 269 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 AQP5P55064 265 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 RGS8P57771 180 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-205ENST00000485397 POU3F1Q03052 451 aaPredicted RBP16.6■□□□□ 0.25
COL27A1-205ENST00000485397 MFSD13AQ14CX5 517 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 TRIP10Q15642 601 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 KRT73Q86Y46 540 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 OR6S1Q8NH40 331 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 SPDL1Q96EA4 605 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 MOGAT1Q96PD6 335 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 EBF4Q9BQW3 602 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 ASPNQ9BXN1 380 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 SLC52A3Q9NQ40 469 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 SELENONQ9NZV5 590 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 CCDC167Q9P0B6 97 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 TESQ9UGI8 421 aaKnown RBP16.6■□□□□ 0.25
COL27A1-205ENST00000485397 CMAHPQ9Y471 501 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 CORINQ9Y5Q5 1042 aa16.6■□□□□ 0.25
COL27A1-205ENST00000485397 POLR3GO15318 223 aaPredicted RBP16.59■□□□□ 0.25
COL27A1-205ENST00000485397 NR4A1P22736 598 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 APEX1P27695 318 aaKnown RBP16.59■□□□□ 0.25
COL27A1-205ENST00000485397 IDH3AP50213 366 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 CHN2P52757 468 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 NCALDP61601 193 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 PMS2P3Q13401 168 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 CAMK2DQ13557 499 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 SCARB2Q14108 478 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 GSG1Q2KHT4 349 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 ZNF813Q6ZN06 617 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 LRR1Q96L50 414 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 ZNF75AQ96N20 296 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 SNX18Q96RF0 628 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 EPYCQ99645 322 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 MRPL37Q9BZE1 423 aaKnown RBP16.59■□□□□ 0.25
COL27A1-205ENST00000485397 POFUT2Q9Y2G5 429 aa16.59■□□□□ 0.25
COL27A1-205ENST00000485397 TRBV5-3A0A0A0MS03 114 aa16.58■□□□□ 0.24
COL27A1-205ENST00000485397 ZNF500O60304 480 aaPredicted RBP16.58■□□□□ 0.24
COL27A1-205ENST00000485397 SERPINI2O75830 405 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms