RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PYHIN1Q6K0P9 492 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 HSDL2Q6YN16 418 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 WDR86Q86TI4 376 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 ZADH2Q8N4Q0 377 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 OR1F12Q8NHA8 337 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 SPRYD4Q8WW59 207 aaPredicted RBP1.55□□□□□ -2.16
SCAF11-207ENST00000484275 RGP1Q92546 391 aaPredicted RBP1.55□□□□□ -2.16
SCAF11-207ENST00000484275 REEP4Q9H6H4 257 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 UGT1A7Q9HAW7 530 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 UGT1A10Q9HAW8 530 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 UGT1A8Q9HAW9 530 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 TM9SF3Q9HD45 589 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 GLRX2Q9NS18 164 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 CALYQ9NYX4 217 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 MMP17Q9ULZ9 603 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 COPS3Q9UNS2 423 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 MFHAS1Q9Y4C4 1052 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 KDRP35968 1356 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 ANKRD12Q6UB98 2062 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 TNS2Q63HR2 1409 aa1.55□□□□□ -2.16
SCAF11-207ENST00000484275 GPATCH8Q9UKJ3 1502 aaKnown RBP1.55□□□□□ -2.16
SCAF11-207ENST00000484275 MYO16Q9Y6X6 1858 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 SCN1AP35498 2009 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 CIB4A0PJX0 185 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 KRT87PA6NCN2 255 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 H0YHG0 523 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 VAMP5O95183 116 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 CCND2P30279 289 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 CASP4P49662 377 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 GMFBP60983 142 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 ESRRGP62508 458 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 RAP1AP62834 184 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 SLC39A6Q13433 755 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 ZBED5Q49AG3 693 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 NTM-AS1Q6ZSK4 140 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 STPG2Q8N412 459 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 ACOT4Q8N9L9 421 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 CNNM3Q8NE01 707 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 OR10T2Q8NGX3 314 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 SH3YL1Q96HL8 342 aaPredicted RBP1.54□□□□□ -2.16
SCAF11-207ENST00000484275 ELOVL3Q9HB03 270 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 CD84Q9UIB8 345 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 MEMO1Q9Y316 297 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 SEC16AO15027 2179 aa1.54□□□□□ -2.16
SCAF11-207ENST00000484275 IGLV3-22A0A075B6J6 115 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 BTN3A3O00478 584 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 WDR62O43379 1518 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 ZNF207O43670 478 aaKnown RBP1.53□□□□□ -2.16
SCAF11-207ENST00000484275 SF3B1O75533 1304 aaKnown RBP eCLIP1.53□□□□□ -2.16
SCAF11-207ENST00000484275 CCNKO75909 580 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 OXSR1O95747 527 aaPredicted RBP1.53□□□□□ -2.16
SCAF11-207ENST00000484275 POLR2MP0CAP2 368 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 SLC7A9P82251 487 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 ASPHQ12797 758 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 OXA1LQ15070 435 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 TMEM41BQ5BJD5 291 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 COA6Q5JTJ3 125 aaKnown RBP1.53□□□□□ -2.16
SCAF11-207ENST00000484275 SLC35F2Q8IXU6 374 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 ECSITQ9BQ95 431 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 GABARAPL3Q9BY60 117 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 CHRNA9Q9UGM1 479 aa1.53□□□□□ -2.16
SCAF11-207ENST00000484275 CEMIPQ8WUJ3 1361 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 A0A087WZY1 265 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 IGKV1D-13A0A0B4J2D9 117 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 TCRBV9S1A1TA0A576 114 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 H3BNH8 94 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 SGK1O00141 431 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 XKRYO14609 159 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 P0C880 135 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 IGKV1-13P0DP09 117 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 GAP43P17677 238 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 PAX7P23759 505 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 HTR2AP28223 471 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 CA8P35219 290 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 DUSP7Q16829 419 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 BLOC1S2Q6QNY1 142 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 CCDC65Q8IXS2 484 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 PIANPQ8IYJ0 282 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 CENPLQ8N0S6 344 aaPredicted RBP1.52□□□□□ -2.17
SCAF11-207ENST00000484275 LGI3Q8N145 548 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 IPMKQ8NFU5 416 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 VN1R2Q8NFZ6 395 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 OR52H1Q8NGJ2 320 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 KRT23Q9C075 422 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 RANBP3Q9H6Z4 567 aaPredicted RBP1.52□□□□□ -2.17
SCAF11-207ENST00000484275 LY9Q9HBG7 655 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 RAB18Q9NP72 206 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 GIN1Q9NXP7 522 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 ZNRD1Q9P1U0 126 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 NLRC5Q86WI3 1866 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 TENM1Q9UKZ4 2725 aa1.52□□□□□ -2.17
SCAF11-207ENST00000484275 AP2A1O95782 977 aa1.51□□□□□ -2.17
SCAF11-207ENST00000484275 CALCBP10092 127 aa1.51□□□□□ -2.17
SCAF11-207ENST00000484275 ARF4P18085 180 aaPredicted RBP1.51□□□□□ -2.17
SCAF11-207ENST00000484275 IMPDH1P20839 514 aa1.51□□□□□ -2.17
SCAF11-207ENST00000484275 HMGB2P26583 209 aaKnown RBP1.51□□□□□ -2.17
SCAF11-207ENST00000484275 GYG1P46976 350 aa1.51□□□□□ -2.17
SCAF11-207ENST00000484275 QARSP47897 775 aaKnown RBP1.51□□□□□ -2.17
SCAF11-207ENST00000484275 PLD1Q13393 1074 aa1.51□□□□□ -2.17
SCAF11-207ENST00000484275 AQP6Q13520 282 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms